Gene : Phvul.006G087600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11999//PTHR11999:SF92 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE // SUBFAMILY NOT NAMED Genomic Order:  867
Name:  ? Phvul.006G087600 Secondary Identifier:  ? PAC:37171923
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1305 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4321 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G087600 0.5kb upstream 0.5kb upstream 7197 true Chr06: 19960173-19967369 Phaseolus vulgaris
Phvul.006G087600 0.5kb upstream 0.5kb upstream 500 false Chr06: 19960173-19960672 Phaseolus vulgaris
Phvul.006G087600 0.5kb downstream 0.5kb downstream 7197 true Chr06: 19960673-19967869 Phaseolus vulgaris
Phvul.006G087600 0.5kb downstream 0.5kb downstream 500 false Chr06: 19967370-19967869 Phaseolus vulgaris
Phvul.006G087600 1.0kb upstream 1.0kb upstream 7697 true Chr06: 19959673-19967369 Phaseolus vulgaris
Phvul.006G087600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19959673-19960672 Phaseolus vulgaris
Phvul.006G087600 1.0kb downstream 1.0kb downstream 7697 true Chr06: 19960673-19968369 Phaseolus vulgaris
Phvul.006G087600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19967370-19968369 Phaseolus vulgaris
Phvul.006G087600 2.0kb upstream 2.0kb upstream 8697 true Chr06: 19958673-19967369 Phaseolus vulgaris
Phvul.006G087600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19958673-19960672 Phaseolus vulgaris
Phvul.006G087600 2.0kb downstream 2.0kb downstream 8697 true Chr06: 19960673-19969369 Phaseolus vulgaris
Phvul.006G087600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19967370-19969369 Phaseolus vulgaris
Phvul.006G087600 5.0kb upstream 5.0kb upstream 11697 true Chr06: 19955673-19967369 Phaseolus vulgaris
Phvul.006G087600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19955673-19960672 Phaseolus vulgaris
Phvul.006G087600 5.0kb downstream 5.0kb downstream 11697 true Chr06: 19960673-19972369 Phaseolus vulgaris
Phvul.006G087600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19967370-19972369 Phaseolus vulgaris
Phvul.006G087600 10.0kb upstream 10.0kb upstream 16697 true Chr06: 19950673-19967369 Phaseolus vulgaris
Phvul.006G087600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19950673-19960672 Phaseolus vulgaris
Phvul.006G087600 10.0kb downstream 10.0kb downstream 16697 true Chr06: 19960673-19977369 Phaseolus vulgaris
Phvul.006G087600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19967370-19977369 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309616 5265 Fabidae View MSA
124073926 5270 Rosid View MSA
123749296 5271 Pentapetalae View MSA
122788993 5272 Eudicot View MSA
122047192 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.211 0.0 410.244 High  
cufflinks 59.2697 0.0 160.775 High Low
cufflinks 197.44 0.0 629.119 High High
cufflinks 274.19 0.0 916.419 High High
cufflinks 54.0049 0.0 144.895 High Low
cufflinks 87.8569 0.0 248.294 High  
cufflinks 91.5536 0.0 260.18 High  
cufflinks 57.5509 0.0 155.815 High Low
cufflinks 108.026 0.0 313.238 High  
cufflinks 89.477 0.0 252.386 High  
cufflinks 87.7221 0.0 246.999 High  

0 Strain