Gene : Phvul.006G087900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24006:SF442 - PROTEIN GADR-4 Genomic Order:  870
Name:  ? Phvul.006G087900 Secondary Identifier:  ? PAC:37172855
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G087900 0.5kb upstream 0.5kb upstream 5965 true Chr06: 19986696-19992660 Phaseolus vulgaris
Phvul.006G087900 0.5kb upstream 0.5kb upstream 500 false Chr06: 19986696-19987195 Phaseolus vulgaris
Phvul.006G087900 0.5kb downstream 0.5kb downstream 5965 true Chr06: 19987196-19993160 Phaseolus vulgaris
Phvul.006G087900 0.5kb downstream 0.5kb downstream 500 false Chr06: 19992661-19993160 Phaseolus vulgaris
Phvul.006G087900 1.0kb upstream 1.0kb upstream 6465 true Chr06: 19986196-19992660 Phaseolus vulgaris
Phvul.006G087900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19986196-19987195 Phaseolus vulgaris
Phvul.006G087900 1.0kb downstream 1.0kb downstream 6465 true Chr06: 19987196-19993660 Phaseolus vulgaris
Phvul.006G087900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19992661-19993660 Phaseolus vulgaris
Phvul.006G087900 2.0kb upstream 2.0kb upstream 7465 true Chr06: 19985196-19992660 Phaseolus vulgaris
Phvul.006G087900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19985196-19987195 Phaseolus vulgaris
Phvul.006G087900 2.0kb downstream 2.0kb downstream 7465 true Chr06: 19987196-19994660 Phaseolus vulgaris
Phvul.006G087900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19992661-19994660 Phaseolus vulgaris
Phvul.006G087900 5.0kb upstream 5.0kb upstream 10465 true Chr06: 19982196-19992660 Phaseolus vulgaris
Phvul.006G087900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19982196-19987195 Phaseolus vulgaris
Phvul.006G087900 5.0kb downstream 5.0kb downstream 10465 true Chr06: 19987196-19997660 Phaseolus vulgaris
Phvul.006G087900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19992661-19997660 Phaseolus vulgaris
Phvul.006G087900 10.0kb upstream 10.0kb upstream 15465 true Chr06: 19977196-19992660 Phaseolus vulgaris
Phvul.006G087900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19977196-19987195 Phaseolus vulgaris
Phvul.006G087900 10.0kb downstream 10.0kb downstream 15465 true Chr06: 19987196-20002660 Phaseolus vulgaris
Phvul.006G087900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19992661-20002660 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297297 5265 Fabidae View MSA
124062765 5270 Rosid View MSA
123740566 5271 Pentapetalae View MSA
122791928 5272 Eudicot View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.13409 0.0 9.0073   Low
cufflinks 5.46305 0.0 14.9213    
cufflinks 9.21728 0.0 24.2281    
cufflinks 5.19328 0.0 14.3083    
cufflinks 9.00738 0.0 23.7027    
cufflinks 7.32939 0.0 19.5623    
cufflinks 8.02637 0.0 21.2704    
cufflinks 6.60496 0.0 17.7571    
cufflinks 9.52695 0.0 25.0233   High
cufflinks 5.27155 0.0 14.4171    
cufflinks 7.48437 0.0 19.9343    

0 Strain