Gene : Phvul.010G142900 P. vulgaris v2.1
Defline:  (1 of 2) K12125 - protein EARLY FLOWERING 3 (ELF3) Genomic Order:  1440
Name:  ? Phvul.010G142900 Secondary Identifier:  ? PAC:37142718
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G142900 0.5kb upstream 0.5kb upstream 6979 true Chr10: 42494816-42501794 Phaseolus vulgaris
Phvul.010G142900 0.5kb upstream 0.5kb upstream 500 false Chr10: 42501295-42501794 Phaseolus vulgaris
Phvul.010G142900 0.5kb downstream 0.5kb downstream 6979 true Chr10: 42494316-42501294 Phaseolus vulgaris
Phvul.010G142900 0.5kb downstream 0.5kb downstream 500 false Chr10: 42494316-42494815 Phaseolus vulgaris
Phvul.010G142900 1.0kb upstream 1.0kb upstream 7479 true Chr10: 42494816-42502294 Phaseolus vulgaris
Phvul.010G142900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42501295-42502294 Phaseolus vulgaris
Phvul.010G142900 1.0kb downstream 1.0kb downstream 7479 true Chr10: 42493816-42501294 Phaseolus vulgaris
Phvul.010G142900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42493816-42494815 Phaseolus vulgaris
Phvul.010G142900 2.0kb upstream 2.0kb upstream 8479 true Chr10: 42494816-42503294 Phaseolus vulgaris
Phvul.010G142900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42501295-42503294 Phaseolus vulgaris
Phvul.010G142900 2.0kb downstream 2.0kb downstream 8479 true Chr10: 42492816-42501294 Phaseolus vulgaris
Phvul.010G142900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42492816-42494815 Phaseolus vulgaris
Phvul.010G142900 5.0kb upstream 5.0kb upstream 11479 true Chr10: 42494816-42506294 Phaseolus vulgaris
Phvul.010G142900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42501295-42506294 Phaseolus vulgaris
Phvul.010G142900 5.0kb downstream 5.0kb downstream 11479 true Chr10: 42489816-42501294 Phaseolus vulgaris
Phvul.010G142900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42489816-42494815 Phaseolus vulgaris
Phvul.010G142900 10.0kb upstream 10.0kb upstream 16479 true Chr10: 42494816-42511294 Phaseolus vulgaris
Phvul.010G142900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42501295-42511294 Phaseolus vulgaris
Phvul.010G142900 10.0kb downstream 10.0kb downstream 16479 true Chr10: 42484816-42501294 Phaseolus vulgaris
Phvul.010G142900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42484816-42494815 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300751 5265 Fabidae View MSA
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674742 0.0 4.35966    
cufflinks 4.06193 0.0 15.9322    
cufflinks 33.873 0.0 135.856   High
cufflinks 0.621531 0.0 3.40006    
cufflinks 2.32071 0.0 9.02781    
cufflinks 22.5826 0.0 98.8148   High
cufflinks 0.335565 0.0 3.22708 Low  
cufflinks 1.24147 0.0 9.22237    
cufflinks 0.0316275 0.0 0.149757 Low Low
cufflinks 0.88535 0.0 5.2619    
cufflinks 2.95653 0.0 16.0738    

0 Strain