Gene : Phvul.010G142800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1439
Name:  ? Phvul.010G142800 Secondary Identifier:  ? PAC:37142195
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G142800 0.5kb upstream 0.5kb upstream 5756 true Chr10: 42486730-42492485 Phaseolus vulgaris
Phvul.010G142800 0.5kb upstream 0.5kb upstream 500 false Chr10: 42491986-42492485 Phaseolus vulgaris
Phvul.010G142800 0.5kb downstream 0.5kb downstream 5756 true Chr10: 42486230-42491985 Phaseolus vulgaris
Phvul.010G142800 0.5kb downstream 0.5kb downstream 500 false Chr10: 42486230-42486729 Phaseolus vulgaris
Phvul.010G142800 1.0kb upstream 1.0kb upstream 6256 true Chr10: 42486730-42492985 Phaseolus vulgaris
Phvul.010G142800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42491986-42492985 Phaseolus vulgaris
Phvul.010G142800 1.0kb downstream 1.0kb downstream 6256 true Chr10: 42485730-42491985 Phaseolus vulgaris
Phvul.010G142800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42485730-42486729 Phaseolus vulgaris
Phvul.010G142800 2.0kb upstream 2.0kb upstream 7256 true Chr10: 42486730-42493985 Phaseolus vulgaris
Phvul.010G142800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42491986-42493985 Phaseolus vulgaris
Phvul.010G142800 2.0kb downstream 2.0kb downstream 7256 true Chr10: 42484730-42491985 Phaseolus vulgaris
Phvul.010G142800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42484730-42486729 Phaseolus vulgaris
Phvul.010G142800 5.0kb upstream 5.0kb upstream 10256 true Chr10: 42486730-42496985 Phaseolus vulgaris
Phvul.010G142800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42491986-42496985 Phaseolus vulgaris
Phvul.010G142800 5.0kb downstream 5.0kb downstream 10256 true Chr10: 42481730-42491985 Phaseolus vulgaris
Phvul.010G142800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42481730-42486729 Phaseolus vulgaris
Phvul.010G142800 10.0kb upstream 10.0kb upstream 15256 true Chr10: 42486730-42501985 Phaseolus vulgaris
Phvul.010G142800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42491986-42501985 Phaseolus vulgaris
Phvul.010G142800 10.0kb downstream 10.0kb downstream 15256 true Chr10: 42476730-42491985 Phaseolus vulgaris
Phvul.010G142800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42476730-42486729 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041085 5273 Angiosperm View MSA
122307574 5265 Fabidae View MSA
124070934 5270 Rosid View MSA
123745027 5271 Pentapetalae View MSA
122787278 5272 Eudicot View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12803 0.0 12.0209    
cufflinks 4.31091 0.0 12.5126    
cufflinks 4.84894 0.0 13.8596    
cufflinks 5.31189 0.0 15.1813   High
cufflinks 3.48039 0.0 10.3894    
cufflinks 5.48332 0.0 15.5172   High
cufflinks 3.35997 0.0 10.0293    
cufflinks 5.17445 0.0 14.6696   High
cufflinks 3.07653 0.0 9.32431   Low
cufflinks 3.74516 0.0 11.0514    
cufflinks 3.24754 0.0 9.77872   Low

0 Strain