Gene : Phvul.010G146000 P. vulgaris v2.1
Defline:  (1 of 36) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1471
Name:  ? Phvul.010G146000 Secondary Identifier:  ? PAC:37143632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G146000 0.5kb upstream 0.5kb upstream 1282 true Chr10: 42752688-42753969 Phaseolus vulgaris
Phvul.010G146000 0.5kb upstream 0.5kb upstream 500 false Chr10: 42753470-42753969 Phaseolus vulgaris
Phvul.010G146000 0.5kb downstream 0.5kb downstream 1282 true Chr10: 42752188-42753469 Phaseolus vulgaris
Phvul.010G146000 0.5kb downstream 0.5kb downstream 500 false Chr10: 42752188-42752687 Phaseolus vulgaris
Phvul.010G146000 1.0kb upstream 1.0kb upstream 1782 true Chr10: 42752688-42754469 Phaseolus vulgaris
Phvul.010G146000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42753470-42754469 Phaseolus vulgaris
Phvul.010G146000 1.0kb downstream 1.0kb downstream 1782 true Chr10: 42751688-42753469 Phaseolus vulgaris
Phvul.010G146000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42751688-42752687 Phaseolus vulgaris
Phvul.010G146000 2.0kb upstream 2.0kb upstream 2782 true Chr10: 42752688-42755469 Phaseolus vulgaris
Phvul.010G146000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42753470-42755469 Phaseolus vulgaris
Phvul.010G146000 2.0kb downstream 2.0kb downstream 2782 true Chr10: 42750688-42753469 Phaseolus vulgaris
Phvul.010G146000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42750688-42752687 Phaseolus vulgaris
Phvul.010G146000 5.0kb upstream 5.0kb upstream 5782 true Chr10: 42752688-42758469 Phaseolus vulgaris
Phvul.010G146000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42753470-42758469 Phaseolus vulgaris
Phvul.010G146000 5.0kb downstream 5.0kb downstream 5782 true Chr10: 42747688-42753469 Phaseolus vulgaris
Phvul.010G146000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42747688-42752687 Phaseolus vulgaris
Phvul.010G146000 10.0kb upstream 10.0kb upstream 10782 true Chr10: 42752688-42763469 Phaseolus vulgaris
Phvul.010G146000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42753470-42763469 Phaseolus vulgaris
Phvul.010G146000 10.0kb downstream 10.0kb downstream 10782 true Chr10: 42742688-42753469 Phaseolus vulgaris
Phvul.010G146000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42742688-42752687 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298873 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.715772 0.0 2.74734    
cufflinks 0.43093 0.0 1.72504 Low  
cufflinks 0.082027 0.0 0.383124 Low Low
cufflinks 4.8309 0.0 15.1744   High
cufflinks 0.489922 0.0 1.92894 Low  
cufflinks 1.59156 0.0 5.72026    
cufflinks 3.89171 0.0 12.556   High
cufflinks 5.39727 0.0 16.9511   High
cufflinks 1.08951 0.0 4.01298    
cufflinks 0.31014 0.0 1.27414 Low  
cufflinks 1.22412 0.0 4.47574    

0 Strain