Gene : Phvul.010G144700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32295:SF10 - CALMODULIN-BINDING FAMILY PROTEIN Genomic Order:  1458
Name:  ? Phvul.010G144700 Secondary Identifier:  ? PAC:37142866
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G144700 0.5kb upstream 0.5kb upstream 3519 true Chr10: 42621151-42624669 Phaseolus vulgaris
Phvul.010G144700 0.5kb upstream 0.5kb upstream 500 false Chr10: 42624170-42624669 Phaseolus vulgaris
Phvul.010G144700 0.5kb downstream 0.5kb downstream 3519 true Chr10: 42620651-42624169 Phaseolus vulgaris
Phvul.010G144700 0.5kb downstream 0.5kb downstream 500 false Chr10: 42620651-42621150 Phaseolus vulgaris
Phvul.010G144700 1.0kb upstream 1.0kb upstream 4019 true Chr10: 42621151-42625169 Phaseolus vulgaris
Phvul.010G144700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42624170-42625169 Phaseolus vulgaris
Phvul.010G144700 1.0kb downstream 1.0kb downstream 4019 true Chr10: 42620151-42624169 Phaseolus vulgaris
Phvul.010G144700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42620151-42621150 Phaseolus vulgaris
Phvul.010G144700 2.0kb upstream 2.0kb upstream 5019 true Chr10: 42621151-42626169 Phaseolus vulgaris
Phvul.010G144700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42624170-42626169 Phaseolus vulgaris
Phvul.010G144700 2.0kb downstream 2.0kb downstream 5019 true Chr10: 42619151-42624169 Phaseolus vulgaris
Phvul.010G144700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42619151-42621150 Phaseolus vulgaris
Phvul.010G144700 5.0kb upstream 5.0kb upstream 8019 true Chr10: 42621151-42629169 Phaseolus vulgaris
Phvul.010G144700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42624170-42629169 Phaseolus vulgaris
Phvul.010G144700 5.0kb downstream 5.0kb downstream 8019 true Chr10: 42616151-42624169 Phaseolus vulgaris
Phvul.010G144700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42616151-42621150 Phaseolus vulgaris
Phvul.010G144700 10.0kb upstream 10.0kb upstream 13019 true Chr10: 42621151-42634169 Phaseolus vulgaris
Phvul.010G144700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42624170-42634169 Phaseolus vulgaris
Phvul.010G144700 10.0kb downstream 10.0kb downstream 13019 true Chr10: 42611151-42624169 Phaseolus vulgaris
Phvul.010G144700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42611151-42621150 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305951 5265 Fabidae View MSA
124070715 5270 Rosid View MSA
123748073 5271 Pentapetalae View MSA
122791637 5272 Eudicot View MSA
122049529 5273 Angiosperm View MSA
121311456 5274 Embryophyte View MSA
123348751 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00621 0.0 5.10439    
cufflinks 0.945218 0.0 3.8148    
cufflinks 1.29488 0.0 4.64052    
cufflinks 0.736983 0.0 4.18078    
cufflinks 2.76618 0.0 10.824    
cufflinks 5.51229 0.0 18.0569   High
cufflinks 1.64231 0.0 5.62027    
cufflinks 0.78332 0.0 4.16999    
cufflinks 3.6255 0.0 13.2002    
cufflinks 0.0589744 0.0 0.261851 Low Low
cufflinks 4.65573 0.0 15.9142   High

0 Strain