Gene : Phvul.010G134600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1353
Name:  ? Phvul.010G134600 Secondary Identifier:  ? PAC:37143411
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G134600 0.5kb upstream 0.5kb upstream 7512 true Chr10: 41671336-41678847 Phaseolus vulgaris
Phvul.010G134600 0.5kb upstream 0.5kb upstream 500 false Chr10: 41678348-41678847 Phaseolus vulgaris
Phvul.010G134600 0.5kb downstream 0.5kb downstream 7512 true Chr10: 41670836-41678347 Phaseolus vulgaris
Phvul.010G134600 0.5kb downstream 0.5kb downstream 500 false Chr10: 41670836-41671335 Phaseolus vulgaris
Phvul.010G134600 1.0kb upstream 1.0kb upstream 8012 true Chr10: 41671336-41679347 Phaseolus vulgaris
Phvul.010G134600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41678348-41679347 Phaseolus vulgaris
Phvul.010G134600 1.0kb downstream 1.0kb downstream 8012 true Chr10: 41670336-41678347 Phaseolus vulgaris
Phvul.010G134600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41670336-41671335 Phaseolus vulgaris
Phvul.010G134600 2.0kb upstream 2.0kb upstream 9012 true Chr10: 41671336-41680347 Phaseolus vulgaris
Phvul.010G134600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41678348-41680347 Phaseolus vulgaris
Phvul.010G134600 2.0kb downstream 2.0kb downstream 9012 true Chr10: 41669336-41678347 Phaseolus vulgaris
Phvul.010G134600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41669336-41671335 Phaseolus vulgaris
Phvul.010G134600 5.0kb upstream 5.0kb upstream 12012 true Chr10: 41671336-41683347 Phaseolus vulgaris
Phvul.010G134600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41678348-41683347 Phaseolus vulgaris
Phvul.010G134600 5.0kb downstream 5.0kb downstream 12012 true Chr10: 41666336-41678347 Phaseolus vulgaris
Phvul.010G134600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41666336-41671335 Phaseolus vulgaris
Phvul.010G134600 10.0kb upstream 10.0kb upstream 17012 true Chr10: 41671336-41688347 Phaseolus vulgaris
Phvul.010G134600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41678348-41688347 Phaseolus vulgaris
Phvul.010G134600 10.0kb downstream 10.0kb downstream 17012 true Chr10: 41661336-41678347 Phaseolus vulgaris
Phvul.010G134600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41661336-41671335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302272 5265 Fabidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.1646 0.0 114.704 High  
cufflinks 48.1106 0.0 149.068 High  
cufflinks 39.3411 0.0 120.462 High  
cufflinks 76.1762 0.0 248.47 High High
cufflinks 41.2162 0.0 127.429 High  
cufflinks 34.0804 0.0 100.42 High Low
cufflinks 49.3754 0.0 156.984 High  
cufflinks 53.9746 0.0 172.58 High  
cufflinks 71.8804 0.0 245.213 High High
cufflinks 30.3841 0.0 101.246   Low
cufflinks 44.8467 0.0 139.373 High  

0 Strain