Gene : Phvul.006G075500 P. vulgaris v2.1
Defline:  (1 of 2) K03237 - translation initiation factor 2 subunit 1 (EIF2S1) Genomic Order:  740
Name:  ? Phvul.006G075500 Secondary Identifier:  ? PAC:37173052
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G075500 0.5kb upstream 0.5kb upstream 3384 true Chr06: 18782742-18786125 Phaseolus vulgaris
Phvul.006G075500 0.5kb upstream 0.5kb upstream 500 false Chr06: 18782742-18783241 Phaseolus vulgaris
Phvul.006G075500 0.5kb downstream 0.5kb downstream 3384 true Chr06: 18783242-18786625 Phaseolus vulgaris
Phvul.006G075500 0.5kb downstream 0.5kb downstream 500 false Chr06: 18786126-18786625 Phaseolus vulgaris
Phvul.006G075500 1.0kb upstream 1.0kb upstream 3884 true Chr06: 18782242-18786125 Phaseolus vulgaris
Phvul.006G075500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18782242-18783241 Phaseolus vulgaris
Phvul.006G075500 1.0kb downstream 1.0kb downstream 3884 true Chr06: 18783242-18787125 Phaseolus vulgaris
Phvul.006G075500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18786126-18787125 Phaseolus vulgaris
Phvul.006G075500 2.0kb upstream 2.0kb upstream 4884 true Chr06: 18781242-18786125 Phaseolus vulgaris
Phvul.006G075500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18781242-18783241 Phaseolus vulgaris
Phvul.006G075500 2.0kb downstream 2.0kb downstream 4884 true Chr06: 18783242-18788125 Phaseolus vulgaris
Phvul.006G075500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18786126-18788125 Phaseolus vulgaris
Phvul.006G075500 5.0kb upstream 5.0kb upstream 7884 true Chr06: 18778242-18786125 Phaseolus vulgaris
Phvul.006G075500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18778242-18783241 Phaseolus vulgaris
Phvul.006G075500 5.0kb downstream 5.0kb downstream 7884 true Chr06: 18783242-18791125 Phaseolus vulgaris
Phvul.006G075500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18786126-18791125 Phaseolus vulgaris
Phvul.006G075500 10.0kb upstream 10.0kb upstream 12884 true Chr06: 18773242-18786125 Phaseolus vulgaris
Phvul.006G075500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18773242-18783241 Phaseolus vulgaris
Phvul.006G075500 10.0kb downstream 10.0kb downstream 12884 true Chr06: 18783242-18796125 Phaseolus vulgaris
Phvul.006G075500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18786126-18796125 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305249 5265 Fabidae View MSA
124064175 5270 Rosid View MSA
123738258 5271 Pentapetalae View MSA
122788927 5272 Eudicot View MSA
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.9063 0.0 122.523 High  
cufflinks 80.7242 0.0 219.064 High High
cufflinks 42.2739 0.0 110.007 High Low
cufflinks 70.2206 0.0 187.33 High  
cufflinks 55.5584 0.0 146.306 High  
cufflinks 36.4385 0.0 94.4193 High Low
cufflinks 48.9601 0.0 128.365 High  
cufflinks 59.4281 0.0 157.673 High  
cufflinks 57.1594 0.0 151.185 High  
cufflinks 86.2784 0.0 235.399 High High
cufflinks 61.124 0.0 161.995 High  

0 Strain