Gene : Phvul.006G076000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23315:SF7 - U-BOX DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  745
Name:  ? Phvul.006G076000 Secondary Identifier:  ? PAC:37172980
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G076000 0.5kb upstream 0.5kb upstream 10045 true Chr06: 18821069-18831113 Phaseolus vulgaris
Phvul.006G076000 0.5kb upstream 0.5kb upstream 500 false Chr06: 18830614-18831113 Phaseolus vulgaris
Phvul.006G076000 0.5kb downstream 0.5kb downstream 10045 true Chr06: 18820569-18830613 Phaseolus vulgaris
Phvul.006G076000 0.5kb downstream 0.5kb downstream 500 false Chr06: 18820569-18821068 Phaseolus vulgaris
Phvul.006G076000 1.0kb upstream 1.0kb upstream 10545 true Chr06: 18821069-18831613 Phaseolus vulgaris
Phvul.006G076000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18830614-18831613 Phaseolus vulgaris
Phvul.006G076000 1.0kb downstream 1.0kb downstream 10545 true Chr06: 18820069-18830613 Phaseolus vulgaris
Phvul.006G076000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18820069-18821068 Phaseolus vulgaris
Phvul.006G076000 2.0kb upstream 2.0kb upstream 11545 true Chr06: 18821069-18832613 Phaseolus vulgaris
Phvul.006G076000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18830614-18832613 Phaseolus vulgaris
Phvul.006G076000 2.0kb downstream 2.0kb downstream 11545 true Chr06: 18819069-18830613 Phaseolus vulgaris
Phvul.006G076000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18819069-18821068 Phaseolus vulgaris
Phvul.006G076000 5.0kb upstream 5.0kb upstream 14545 true Chr06: 18821069-18835613 Phaseolus vulgaris
Phvul.006G076000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18830614-18835613 Phaseolus vulgaris
Phvul.006G076000 5.0kb downstream 5.0kb downstream 14545 true Chr06: 18816069-18830613 Phaseolus vulgaris
Phvul.006G076000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18816069-18821068 Phaseolus vulgaris
Phvul.006G076000 10.0kb upstream 10.0kb upstream 19545 true Chr06: 18821069-18840613 Phaseolus vulgaris
Phvul.006G076000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18830614-18840613 Phaseolus vulgaris
Phvul.006G076000 10.0kb downstream 10.0kb downstream 19545 true Chr06: 18811069-18830613 Phaseolus vulgaris
Phvul.006G076000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18811069-18821068 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308370 5265 Fabidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.46867 0.0 24.5604    
cufflinks 8.3042 0.0 30.5624    
cufflinks 6.90104 0.0 22.9981    
cufflinks 3.91939 0.0 14.6329   Low
cufflinks 8.79343 0.0 31.8463    
cufflinks 7.36444 0.0 27.208    
cufflinks 13.2007 0.0 46.853   High
cufflinks 8.092 0.0 29.5571    
cufflinks 13.4834 0.0 48.0071   High
cufflinks 15.6489 0.0 56.2769   High
cufflinks 6.89576 0.0 25.7442    

0 Strain