Gene : Phvul.010G134700 P. vulgaris v2.1
Defline:  (1 of 19) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  1354
Name:  ? Phvul.010G134700 Secondary Identifier:  ? PAC:37144307
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G134700 0.5kb upstream 0.5kb upstream 4825 true Chr10: 41683577-41688401 Phaseolus vulgaris
Phvul.010G134700 0.5kb upstream 0.5kb upstream 500 false Chr10: 41683577-41684076 Phaseolus vulgaris
Phvul.010G134700 0.5kb downstream 0.5kb downstream 4825 true Chr10: 41684077-41688901 Phaseolus vulgaris
Phvul.010G134700 0.5kb downstream 0.5kb downstream 500 false Chr10: 41688402-41688901 Phaseolus vulgaris
Phvul.010G134700 1.0kb upstream 1.0kb upstream 5325 true Chr10: 41683077-41688401 Phaseolus vulgaris
Phvul.010G134700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41683077-41684076 Phaseolus vulgaris
Phvul.010G134700 1.0kb downstream 1.0kb downstream 5325 true Chr10: 41684077-41689401 Phaseolus vulgaris
Phvul.010G134700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41688402-41689401 Phaseolus vulgaris
Phvul.010G134700 2.0kb upstream 2.0kb upstream 6325 true Chr10: 41682077-41688401 Phaseolus vulgaris
Phvul.010G134700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41682077-41684076 Phaseolus vulgaris
Phvul.010G134700 2.0kb downstream 2.0kb downstream 6325 true Chr10: 41684077-41690401 Phaseolus vulgaris
Phvul.010G134700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41688402-41690401 Phaseolus vulgaris
Phvul.010G134700 5.0kb upstream 5.0kb upstream 9325 true Chr10: 41679077-41688401 Phaseolus vulgaris
Phvul.010G134700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41679077-41684076 Phaseolus vulgaris
Phvul.010G134700 5.0kb downstream 5.0kb downstream 9325 true Chr10: 41684077-41693401 Phaseolus vulgaris
Phvul.010G134700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41688402-41693401 Phaseolus vulgaris
Phvul.010G134700 10.0kb upstream 10.0kb upstream 14325 true Chr10: 41674077-41688401 Phaseolus vulgaris
Phvul.010G134700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41674077-41684076 Phaseolus vulgaris
Phvul.010G134700 10.0kb downstream 10.0kb downstream 14325 true Chr10: 41684077-41698401 Phaseolus vulgaris
Phvul.010G134700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41688402-41698401 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783054 5273 Angiosperm View MSA
122316590 5265 Fabidae View MSA
124037112 5270 Rosid View MSA
123754335 5271 Pentapetalae View MSA
122775718 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30412 0.0 4.52283    
cufflinks 0.400876 0.0 1.73929 Low  
cufflinks 1.13615 0.0 5.19367    
cufflinks 0.556279 0.0 2.41049 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 21.1847 0.0 59.2116   High
cufflinks 0.0285154 0.0 0.135626 Low Low
cufflinks 0.340323 0.0 1.51543 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.94104 0.0 3.55636    
cufflinks 0.0536878 0.0 0.231477 Low Low

0 Strain