Gene : Phvul.010G134900 P. vulgaris v2.1
Defline:  (1 of 3) 1.13.11.12//1.13.11.58 - Linoleate 13S-lipoxygenase / Lipoxidase // Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1356
Name:  ? Phvul.010G134900 Secondary Identifier:  ? PAC:37143516
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5409 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G134900 0.5kb upstream 0.5kb upstream 6246 true Chr10: 41716631-41722876 Phaseolus vulgaris
Phvul.010G134900 0.5kb upstream 0.5kb upstream 500 false Chr10: 41716631-41717130 Phaseolus vulgaris
Phvul.010G134900 0.5kb downstream 0.5kb downstream 6246 true Chr10: 41717131-41723376 Phaseolus vulgaris
Phvul.010G134900 0.5kb downstream 0.5kb downstream 500 false Chr10: 41722877-41723376 Phaseolus vulgaris
Phvul.010G134900 1.0kb upstream 1.0kb upstream 6746 true Chr10: 41716131-41722876 Phaseolus vulgaris
Phvul.010G134900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41716131-41717130 Phaseolus vulgaris
Phvul.010G134900 1.0kb downstream 1.0kb downstream 6746 true Chr10: 41717131-41723876 Phaseolus vulgaris
Phvul.010G134900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41722877-41723876 Phaseolus vulgaris
Phvul.010G134900 2.0kb upstream 2.0kb upstream 7746 true Chr10: 41715131-41722876 Phaseolus vulgaris
Phvul.010G134900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41715131-41717130 Phaseolus vulgaris
Phvul.010G134900 2.0kb downstream 2.0kb downstream 7746 true Chr10: 41717131-41724876 Phaseolus vulgaris
Phvul.010G134900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41722877-41724876 Phaseolus vulgaris
Phvul.010G134900 5.0kb upstream 5.0kb upstream 10746 true Chr10: 41712131-41722876 Phaseolus vulgaris
Phvul.010G134900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41712131-41717130 Phaseolus vulgaris
Phvul.010G134900 5.0kb downstream 5.0kb downstream 10746 true Chr10: 41717131-41727876 Phaseolus vulgaris
Phvul.010G134900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41722877-41727876 Phaseolus vulgaris
Phvul.010G134900 10.0kb upstream 10.0kb upstream 15746 true Chr10: 41707131-41722876 Phaseolus vulgaris
Phvul.010G134900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41707131-41717130 Phaseolus vulgaris
Phvul.010G134900 10.0kb downstream 10.0kb downstream 15746 true Chr10: 41717131-41732876 Phaseolus vulgaris
Phvul.010G134900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41722877-41732876 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656089 5273 Angiosperm View MSA
122297347 5265 Fabidae View MSA
124035999 5270 Rosid View MSA
123609425 5271 Pentapetalae View MSA
122644073 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.937 0.0 308.604 High  
cufflinks 494.629 0.0 2112.51 High High
cufflinks 17.3435 0.0 44.8737    
cufflinks 701.902 0.0 3234.99 High High
cufflinks 147.281 0.0 464.438 High  
cufflinks 23.322 0.0 60.7606    
cufflinks 7.15079 0.0 19.0133    
cufflinks 4.95112 0.0 13.51    
cufflinks 32.0 0.0 84.7126 High  
cufflinks 0.459815 0.0 1.63052   Low
cufflinks 85.4718 0.0 248.645 High  

0 Strain