Gene : Phvul.006G074500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10108//PTHR10108:SF885 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  730
Name:  ? Phvul.006G074500 Secondary Identifier:  ? PAC:37171496
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G074500 0.5kb upstream 0.5kb upstream 1973 true Chr06: 18702296-18704268 Phaseolus vulgaris
Phvul.006G074500 0.5kb upstream 0.5kb upstream 500 false Chr06: 18703769-18704268 Phaseolus vulgaris
Phvul.006G074500 0.5kb downstream 0.5kb downstream 1973 true Chr06: 18701796-18703768 Phaseolus vulgaris
Phvul.006G074500 0.5kb downstream 0.5kb downstream 500 false Chr06: 18701796-18702295 Phaseolus vulgaris
Phvul.006G074500 1.0kb upstream 1.0kb upstream 2473 true Chr06: 18702296-18704768 Phaseolus vulgaris
Phvul.006G074500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18703769-18704768 Phaseolus vulgaris
Phvul.006G074500 1.0kb downstream 1.0kb downstream 2473 true Chr06: 18701296-18703768 Phaseolus vulgaris
Phvul.006G074500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18701296-18702295 Phaseolus vulgaris
Phvul.006G074500 2.0kb upstream 2.0kb upstream 3473 true Chr06: 18702296-18705768 Phaseolus vulgaris
Phvul.006G074500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18703769-18705768 Phaseolus vulgaris
Phvul.006G074500 2.0kb downstream 2.0kb downstream 3473 true Chr06: 18700296-18703768 Phaseolus vulgaris
Phvul.006G074500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18700296-18702295 Phaseolus vulgaris
Phvul.006G074500 5.0kb upstream 5.0kb upstream 6473 true Chr06: 18702296-18708768 Phaseolus vulgaris
Phvul.006G074500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18703769-18708768 Phaseolus vulgaris
Phvul.006G074500 5.0kb downstream 5.0kb downstream 6473 true Chr06: 18697296-18703768 Phaseolus vulgaris
Phvul.006G074500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18697296-18702295 Phaseolus vulgaris
Phvul.006G074500 10.0kb upstream 10.0kb upstream 11473 true Chr06: 18702296-18713768 Phaseolus vulgaris
Phvul.006G074500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18703769-18713768 Phaseolus vulgaris
Phvul.006G074500 10.0kb downstream 10.0kb downstream 11473 true Chr06: 18692296-18703768 Phaseolus vulgaris
Phvul.006G074500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18692296-18702295 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299655 5265 Fabidae View MSA
124069887 5270 Rosid View MSA
123751423 5271 Pentapetalae View MSA
122774012 5272 Eudicot View MSA
122042420 5273 Angiosperm View MSA
121350932 5274 Embryophyte View MSA
123427033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0652968 0.0 0.290603 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0375786 0.0 0.176453 Low  
cufflinks 0.0301292 0.0 0.145269 Low Low
cufflinks 0.0489031 0.0 0.222655 Low  
cufflinks 0.0921844 0.0 0.395163 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0668818 0.0 0.295904 Low  

0 Strain