Gene : Phvul.006G078500 P. vulgaris v2.1
Defline:  (1 of 66) PF00170 - bZIP transcription factor (bZIP_1) Genomic Order:  770
Name:  ? Phvul.006G078500 Secondary Identifier:  ? PAC:37171345
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G078500 0.5kb upstream 0.5kb upstream 4021 true Chr06: 19029590-19033610 Phaseolus vulgaris
Phvul.006G078500 0.5kb upstream 0.5kb upstream 500 false Chr06: 19033111-19033610 Phaseolus vulgaris
Phvul.006G078500 0.5kb downstream 0.5kb downstream 4021 true Chr06: 19029090-19033110 Phaseolus vulgaris
Phvul.006G078500 0.5kb downstream 0.5kb downstream 500 false Chr06: 19029090-19029589 Phaseolus vulgaris
Phvul.006G078500 1.0kb upstream 1.0kb upstream 4521 true Chr06: 19029590-19034110 Phaseolus vulgaris
Phvul.006G078500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19033111-19034110 Phaseolus vulgaris
Phvul.006G078500 1.0kb downstream 1.0kb downstream 4521 true Chr06: 19028590-19033110 Phaseolus vulgaris
Phvul.006G078500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19028590-19029589 Phaseolus vulgaris
Phvul.006G078500 2.0kb upstream 2.0kb upstream 5521 true Chr06: 19029590-19035110 Phaseolus vulgaris
Phvul.006G078500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19033111-19035110 Phaseolus vulgaris
Phvul.006G078500 2.0kb downstream 2.0kb downstream 5521 true Chr06: 19027590-19033110 Phaseolus vulgaris
Phvul.006G078500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19027590-19029589 Phaseolus vulgaris
Phvul.006G078500 5.0kb upstream 5.0kb upstream 8521 true Chr06: 19029590-19038110 Phaseolus vulgaris
Phvul.006G078500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19033111-19038110 Phaseolus vulgaris
Phvul.006G078500 5.0kb downstream 5.0kb downstream 8521 true Chr06: 19024590-19033110 Phaseolus vulgaris
Phvul.006G078500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19024590-19029589 Phaseolus vulgaris
Phvul.006G078500 10.0kb upstream 10.0kb upstream 13521 true Chr06: 19029590-19043110 Phaseolus vulgaris
Phvul.006G078500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19033111-19043110 Phaseolus vulgaris
Phvul.006G078500 10.0kb downstream 10.0kb downstream 13521 true Chr06: 19019590-19033110 Phaseolus vulgaris
Phvul.006G078500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19019590-19029589 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314195 5265 Fabidae View MSA
124064643 5270 Rosid View MSA
123746615 5271 Pentapetalae View MSA
122797206 5272 Eudicot View MSA
122046720 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310646 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87094 0.0 5.91046   Low
cufflinks 6.02316 0.0 16.7729    
cufflinks 5.80138 0.0 16.2753    
cufflinks 3.64862 0.0 10.6313    
cufflinks 4.80127 0.0 13.6685    
cufflinks 3.86039 0.0 11.2341    
cufflinks 4.97821 0.0 14.0237    
cufflinks 5.65588 0.0 15.8219    
cufflinks 4.28718 0.0 12.2448    
cufflinks 1.54062 0.0 4.97168   Low
cufflinks 6.31521 0.0 17.4836    

0 Strain