Gene : Phvul.006G077200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  757
Name:  ? Phvul.006G077200 Secondary Identifier:  ? PAC:37173597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G077200 0.5kb upstream 0.5kb upstream 2969 true Chr06: 18914108-18917076 Phaseolus vulgaris
Phvul.006G077200 0.5kb upstream 0.5kb upstream 500 false Chr06: 18916577-18917076 Phaseolus vulgaris
Phvul.006G077200 0.5kb downstream 0.5kb downstream 2969 true Chr06: 18913608-18916576 Phaseolus vulgaris
Phvul.006G077200 0.5kb downstream 0.5kb downstream 500 false Chr06: 18913608-18914107 Phaseolus vulgaris
Phvul.006G077200 1.0kb upstream 1.0kb upstream 3469 true Chr06: 18914108-18917576 Phaseolus vulgaris
Phvul.006G077200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18916577-18917576 Phaseolus vulgaris
Phvul.006G077200 1.0kb downstream 1.0kb downstream 3469 true Chr06: 18913108-18916576 Phaseolus vulgaris
Phvul.006G077200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18913108-18914107 Phaseolus vulgaris
Phvul.006G077200 2.0kb upstream 2.0kb upstream 4469 true Chr06: 18914108-18918576 Phaseolus vulgaris
Phvul.006G077200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18916577-18918576 Phaseolus vulgaris
Phvul.006G077200 2.0kb downstream 2.0kb downstream 4469 true Chr06: 18912108-18916576 Phaseolus vulgaris
Phvul.006G077200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18912108-18914107 Phaseolus vulgaris
Phvul.006G077200 5.0kb upstream 5.0kb upstream 7469 true Chr06: 18914108-18921576 Phaseolus vulgaris
Phvul.006G077200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18916577-18921576 Phaseolus vulgaris
Phvul.006G077200 5.0kb downstream 5.0kb downstream 7469 true Chr06: 18909108-18916576 Phaseolus vulgaris
Phvul.006G077200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18909108-18914107 Phaseolus vulgaris
Phvul.006G077200 10.0kb upstream 10.0kb upstream 12469 true Chr06: 18914108-18926576 Phaseolus vulgaris
Phvul.006G077200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18916577-18926576 Phaseolus vulgaris
Phvul.006G077200 10.0kb downstream 10.0kb downstream 12469 true Chr06: 18904108-18916576 Phaseolus vulgaris
Phvul.006G077200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18904108-18914107 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.5151 0.0 120.389 High  
cufflinks 48.8991 0.0 126.667 High  
cufflinks 60.702 0.0 158.357 High  
cufflinks 583.698 0.0 2024.58 High High
cufflinks 146.319 0.0 407.723 High  
cufflinks 97.8795 0.0 263.436 High  
cufflinks 7.63005 0.0 21.7934    
cufflinks 15.2462 0.0 40.916    
cufflinks 10.4734 0.0 29.0673    
cufflinks 0.543145 0.0 2.0593   Low
cufflinks 132.382 0.0 364.836 High  

0 Strain