Gene : Phvul.010G135500 P. vulgaris v2.1
Defline:  (1 of 23) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1364
Name:  ? Phvul.010G135500 Secondary Identifier:  ? PAC:37142476
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G135500 0.5kb upstream 0.5kb upstream 5044 true Chr10: 41815669-41820712 Phaseolus vulgaris
Phvul.010G135500 0.5kb upstream 0.5kb upstream 500 false Chr10: 41815669-41816168 Phaseolus vulgaris
Phvul.010G135500 0.5kb downstream 0.5kb downstream 5044 true Chr10: 41816169-41821212 Phaseolus vulgaris
Phvul.010G135500 0.5kb downstream 0.5kb downstream 500 false Chr10: 41820713-41821212 Phaseolus vulgaris
Phvul.010G135500 1.0kb upstream 1.0kb upstream 5544 true Chr10: 41815169-41820712 Phaseolus vulgaris
Phvul.010G135500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41815169-41816168 Phaseolus vulgaris
Phvul.010G135500 1.0kb downstream 1.0kb downstream 5544 true Chr10: 41816169-41821712 Phaseolus vulgaris
Phvul.010G135500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41820713-41821712 Phaseolus vulgaris
Phvul.010G135500 2.0kb upstream 2.0kb upstream 6544 true Chr10: 41814169-41820712 Phaseolus vulgaris
Phvul.010G135500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41814169-41816168 Phaseolus vulgaris
Phvul.010G135500 2.0kb downstream 2.0kb downstream 6544 true Chr10: 41816169-41822712 Phaseolus vulgaris
Phvul.010G135500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41820713-41822712 Phaseolus vulgaris
Phvul.010G135500 5.0kb upstream 5.0kb upstream 9544 true Chr10: 41811169-41820712 Phaseolus vulgaris
Phvul.010G135500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41811169-41816168 Phaseolus vulgaris
Phvul.010G135500 5.0kb downstream 5.0kb downstream 9544 true Chr10: 41816169-41825712 Phaseolus vulgaris
Phvul.010G135500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41820713-41825712 Phaseolus vulgaris
Phvul.010G135500 10.0kb upstream 10.0kb upstream 14544 true Chr10: 41806169-41820712 Phaseolus vulgaris
Phvul.010G135500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41806169-41816168 Phaseolus vulgaris
Phvul.010G135500 10.0kb downstream 10.0kb downstream 14544 true Chr10: 41816169-41830712 Phaseolus vulgaris
Phvul.010G135500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41820713-41830712 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314818 5265 Fabidae View MSA
124052352 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0338548 0.0 0.158967 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.10953 0.0 22.277    
cufflinks 5.09193 0.0 14.5434    
cufflinks 5.76889 0.0 16.3542    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain