Gene : Phvul.010G135701 P. vulgaris v2.1
Defline:  (1 of 23) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1366
Name:  ? Phvul.010G135701 Secondary Identifier:  ? PAC:37144293
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G135701 0.5kb upstream 0.5kb upstream 2681 true Chr10: 41852993-41855673 Phaseolus vulgaris
Phvul.010G135701 0.5kb upstream 0.5kb upstream 500 false Chr10: 41852993-41853492 Phaseolus vulgaris
Phvul.010G135701 0.5kb downstream 0.5kb downstream 2681 true Chr10: 41853493-41856173 Phaseolus vulgaris
Phvul.010G135701 0.5kb downstream 0.5kb downstream 500 false Chr10: 41855674-41856173 Phaseolus vulgaris
Phvul.010G135701 1.0kb upstream 1.0kb upstream 3181 true Chr10: 41852493-41855673 Phaseolus vulgaris
Phvul.010G135701 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41852493-41853492 Phaseolus vulgaris
Phvul.010G135701 1.0kb downstream 1.0kb downstream 3181 true Chr10: 41853493-41856673 Phaseolus vulgaris
Phvul.010G135701 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41855674-41856673 Phaseolus vulgaris
Phvul.010G135701 2.0kb upstream 2.0kb upstream 4181 true Chr10: 41851493-41855673 Phaseolus vulgaris
Phvul.010G135701 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41851493-41853492 Phaseolus vulgaris
Phvul.010G135701 2.0kb downstream 2.0kb downstream 4181 true Chr10: 41853493-41857673 Phaseolus vulgaris
Phvul.010G135701 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41855674-41857673 Phaseolus vulgaris
Phvul.010G135701 5.0kb upstream 5.0kb upstream 7181 true Chr10: 41848493-41855673 Phaseolus vulgaris
Phvul.010G135701 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41848493-41853492 Phaseolus vulgaris
Phvul.010G135701 5.0kb downstream 5.0kb downstream 7181 true Chr10: 41853493-41860673 Phaseolus vulgaris
Phvul.010G135701 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41855674-41860673 Phaseolus vulgaris
Phvul.010G135701 10.0kb upstream 10.0kb upstream 12181 true Chr10: 41843493-41855673 Phaseolus vulgaris
Phvul.010G135701 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41843493-41853492 Phaseolus vulgaris
Phvul.010G135701 10.0kb downstream 10.0kb downstream 12181 true Chr10: 41853493-41865673 Phaseolus vulgaris
Phvul.010G135701 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41855674-41865673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313161 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.885938 0.0 3.19909    
cufflinks 4.03537 0.0 12.3489    
cufflinks 2.92747 0.0 9.23428    
cufflinks 7.3734 0.0 21.24    
cufflinks 0.427723 0.0 1.65144 Low  
cufflinks 7.36985 0.0 21.0482    
cufflinks 0.0310172 0.0 0.151907 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.269294 0.0 1.07342 Low  
cufflinks 3.4169 0.0 10.7432    

0 Strain