Gene : Phvul.006G079800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11 Genomic Order:  783
Name:  ? Phvul.006G079800 Secondary Identifier:  ? PAC:37172827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G079800 0.5kb upstream 0.5kb upstream 8975 true Chr06: 19171919-19180893 Phaseolus vulgaris
Phvul.006G079800 0.5kb upstream 0.5kb upstream 500 false Chr06: 19171919-19172418 Phaseolus vulgaris
Phvul.006G079800 0.5kb downstream 0.5kb downstream 8975 true Chr06: 19172419-19181393 Phaseolus vulgaris
Phvul.006G079800 0.5kb downstream 0.5kb downstream 500 false Chr06: 19180894-19181393 Phaseolus vulgaris
Phvul.006G079800 1.0kb upstream 1.0kb upstream 9475 true Chr06: 19171419-19180893 Phaseolus vulgaris
Phvul.006G079800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19171419-19172418 Phaseolus vulgaris
Phvul.006G079800 1.0kb downstream 1.0kb downstream 9475 true Chr06: 19172419-19181893 Phaseolus vulgaris
Phvul.006G079800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19180894-19181893 Phaseolus vulgaris
Phvul.006G079800 2.0kb upstream 2.0kb upstream 10475 true Chr06: 19170419-19180893 Phaseolus vulgaris
Phvul.006G079800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19170419-19172418 Phaseolus vulgaris
Phvul.006G079800 2.0kb downstream 2.0kb downstream 10475 true Chr06: 19172419-19182893 Phaseolus vulgaris
Phvul.006G079800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19180894-19182893 Phaseolus vulgaris
Phvul.006G079800 5.0kb upstream 5.0kb upstream 13475 true Chr06: 19167419-19180893 Phaseolus vulgaris
Phvul.006G079800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19167419-19172418 Phaseolus vulgaris
Phvul.006G079800 5.0kb downstream 5.0kb downstream 13475 true Chr06: 19172419-19185893 Phaseolus vulgaris
Phvul.006G079800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19180894-19185893 Phaseolus vulgaris
Phvul.006G079800 10.0kb upstream 10.0kb upstream 18475 true Chr06: 19162419-19180893 Phaseolus vulgaris
Phvul.006G079800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19162419-19172418 Phaseolus vulgaris
Phvul.006G079800 10.0kb downstream 10.0kb downstream 18475 true Chr06: 19172419-19190893 Phaseolus vulgaris
Phvul.006G079800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19180894-19190893 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305486 5265 Fabidae View MSA
124070634 5270 Rosid View MSA
123742512 5271 Pentapetalae View MSA
122795346 5272 Eudicot View MSA
122048298 5273 Angiosperm View MSA
121348302 5274 Embryophyte View MSA
123425824 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.38125 0.0 19.7632   Low
cufflinks 13.9677 0.0 39.1465    
cufflinks 18.958 0.0 52.8896   High
cufflinks 6.08976 0.0 19.0068   Low
cufflinks 13.3251 0.0 37.637    
cufflinks 20.5325 0.0 57.4114   High
cufflinks 11.9001 0.0 41.7938    
cufflinks 12.8824 0.0 45.083    
cufflinks 10.6843 0.0 37.8831    
cufflinks 15.6839 0.0 56.5043    
cufflinks 11.6729 0.0 33.2087    

0 Strain