Gene : Phvul.006G064100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  620
Name:  ? Phvul.006G064100 Secondary Identifier:  ? PAC:37172291
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7238 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G064100 0.5kb upstream 0.5kb upstream 8584 true Chr06: 17413559-17422142 Phaseolus vulgaris
Phvul.006G064100 0.5kb upstream 0.5kb upstream 500 false Chr06: 17421643-17422142 Phaseolus vulgaris
Phvul.006G064100 0.5kb downstream 0.5kb downstream 8584 true Chr06: 17413059-17421642 Phaseolus vulgaris
Phvul.006G064100 0.5kb downstream 0.5kb downstream 500 false Chr06: 17413059-17413558 Phaseolus vulgaris
Phvul.006G064100 1.0kb upstream 1.0kb upstream 9084 true Chr06: 17413559-17422642 Phaseolus vulgaris
Phvul.006G064100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17421643-17422642 Phaseolus vulgaris
Phvul.006G064100 1.0kb downstream 1.0kb downstream 9084 true Chr06: 17412559-17421642 Phaseolus vulgaris
Phvul.006G064100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17412559-17413558 Phaseolus vulgaris
Phvul.006G064100 2.0kb upstream 2.0kb upstream 10084 true Chr06: 17413559-17423642 Phaseolus vulgaris
Phvul.006G064100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17421643-17423642 Phaseolus vulgaris
Phvul.006G064100 2.0kb downstream 2.0kb downstream 10084 true Chr06: 17411559-17421642 Phaseolus vulgaris
Phvul.006G064100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17411559-17413558 Phaseolus vulgaris
Phvul.006G064100 5.0kb upstream 5.0kb upstream 13084 true Chr06: 17413559-17426642 Phaseolus vulgaris
Phvul.006G064100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17421643-17426642 Phaseolus vulgaris
Phvul.006G064100 5.0kb downstream 5.0kb downstream 13084 true Chr06: 17408559-17421642 Phaseolus vulgaris
Phvul.006G064100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17408559-17413558 Phaseolus vulgaris
Phvul.006G064100 10.0kb upstream 10.0kb upstream 18084 true Chr06: 17413559-17431642 Phaseolus vulgaris
Phvul.006G064100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17421643-17431642 Phaseolus vulgaris
Phvul.006G064100 10.0kb downstream 10.0kb downstream 18084 true Chr06: 17403559-17421642 Phaseolus vulgaris
Phvul.006G064100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17403559-17413558 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304647 5265 Fabidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9311 0.0 28.2816    
cufflinks 8.41162 0.0 21.9127    
cufflinks 143.337 0.0 476.512 High High
cufflinks 10.4741 0.0 27.183    
cufflinks 13.4975 0.0 34.8884    
cufflinks 44.0254 0.0 122.177 High  
cufflinks 7.02532 0.0 18.4588    
cufflinks 11.171 0.0 28.8854    
cufflinks 5.91829 0.0 15.7418   Low
cufflinks 54.7085 0.0 154.972 High High
cufflinks 18.3493 0.0 47.6409    

0 Strain