Gene : Phvul.010G125100 P. vulgaris v2.1
Defline:  (1 of 2) K02998 - small subunit ribosomal protein SAe (RP-SAe, RPSA) Genomic Order:  1256
Name:  ? Phvul.010G125100 Secondary Identifier:  ? PAC:37142747
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G125100 0.5kb upstream 0.5kb upstream 2601 true Chr10: 40632158-40634758 Phaseolus vulgaris
Phvul.010G125100 0.5kb upstream 0.5kb upstream 500 false Chr10: 40634259-40634758 Phaseolus vulgaris
Phvul.010G125100 0.5kb downstream 0.5kb downstream 2601 true Chr10: 40631658-40634258 Phaseolus vulgaris
Phvul.010G125100 0.5kb downstream 0.5kb downstream 500 false Chr10: 40631658-40632157 Phaseolus vulgaris
Phvul.010G125100 1.0kb upstream 1.0kb upstream 3101 true Chr10: 40632158-40635258 Phaseolus vulgaris
Phvul.010G125100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40634259-40635258 Phaseolus vulgaris
Phvul.010G125100 1.0kb downstream 1.0kb downstream 3101 true Chr10: 40631158-40634258 Phaseolus vulgaris
Phvul.010G125100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40631158-40632157 Phaseolus vulgaris
Phvul.010G125100 2.0kb upstream 2.0kb upstream 4101 true Chr10: 40632158-40636258 Phaseolus vulgaris
Phvul.010G125100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40634259-40636258 Phaseolus vulgaris
Phvul.010G125100 2.0kb downstream 2.0kb downstream 4101 true Chr10: 40630158-40634258 Phaseolus vulgaris
Phvul.010G125100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40630158-40632157 Phaseolus vulgaris
Phvul.010G125100 5.0kb upstream 5.0kb upstream 7101 true Chr10: 40632158-40639258 Phaseolus vulgaris
Phvul.010G125100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40634259-40639258 Phaseolus vulgaris
Phvul.010G125100 5.0kb downstream 5.0kb downstream 7101 true Chr10: 40627158-40634258 Phaseolus vulgaris
Phvul.010G125100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40627158-40632157 Phaseolus vulgaris
Phvul.010G125100 10.0kb upstream 10.0kb upstream 12101 true Chr10: 40632158-40644258 Phaseolus vulgaris
Phvul.010G125100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40634259-40644258 Phaseolus vulgaris
Phvul.010G125100 10.0kb downstream 10.0kb downstream 12101 true Chr10: 40622158-40634258 Phaseolus vulgaris
Phvul.010G125100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40622158-40632157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306925 5265 Fabidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 231.812 0.0 1078.89 High  
cufflinks 376.555 0.0 2149.2 High High
cufflinks 127.719 0.0 552.741 High Low
cufflinks 347.978 0.0 1949.95 High High
cufflinks 293.621 0.0 1514.01 High  
cufflinks 153.714 0.0 700.9 High Low
cufflinks 191.483 0.0 848.918 High  
cufflinks 211.048 0.0 952.12 High  
cufflinks 273.688 0.0 1386.65 High  
cufflinks 190.36 0.0 826.132 High  
cufflinks 282.404 0.0 1424.69 High  

0 Strain