Gene : Phvul.006G064300 P. vulgaris v2.1
Defline:  (1 of 1) K02213 - cell division control protein 6 (CDC6) Genomic Order:  622
Name:  ? Phvul.006G064300 Secondary Identifier:  ? PAC:37172938
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G064300 0.5kb upstream 0.5kb upstream 5591 true Chr06: 17445826-17451416 Phaseolus vulgaris
Phvul.006G064300 0.5kb upstream 0.5kb upstream 500 false Chr06: 17445826-17446325 Phaseolus vulgaris
Phvul.006G064300 0.5kb downstream 0.5kb downstream 5591 true Chr06: 17446326-17451916 Phaseolus vulgaris
Phvul.006G064300 0.5kb downstream 0.5kb downstream 500 false Chr06: 17451417-17451916 Phaseolus vulgaris
Phvul.006G064300 1.0kb upstream 1.0kb upstream 6091 true Chr06: 17445326-17451416 Phaseolus vulgaris
Phvul.006G064300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17445326-17446325 Phaseolus vulgaris
Phvul.006G064300 1.0kb downstream 1.0kb downstream 6091 true Chr06: 17446326-17452416 Phaseolus vulgaris
Phvul.006G064300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17451417-17452416 Phaseolus vulgaris
Phvul.006G064300 2.0kb upstream 2.0kb upstream 7091 true Chr06: 17444326-17451416 Phaseolus vulgaris
Phvul.006G064300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17444326-17446325 Phaseolus vulgaris
Phvul.006G064300 2.0kb downstream 2.0kb downstream 7091 true Chr06: 17446326-17453416 Phaseolus vulgaris
Phvul.006G064300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17451417-17453416 Phaseolus vulgaris
Phvul.006G064300 5.0kb upstream 5.0kb upstream 10091 true Chr06: 17441326-17451416 Phaseolus vulgaris
Phvul.006G064300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17441326-17446325 Phaseolus vulgaris
Phvul.006G064300 5.0kb downstream 5.0kb downstream 10091 true Chr06: 17446326-17456416 Phaseolus vulgaris
Phvul.006G064300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17451417-17456416 Phaseolus vulgaris
Phvul.006G064300 10.0kb upstream 10.0kb upstream 15091 true Chr06: 17436326-17451416 Phaseolus vulgaris
Phvul.006G064300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17436326-17446325 Phaseolus vulgaris
Phvul.006G064300 10.0kb downstream 10.0kb downstream 15091 true Chr06: 17446326-17461416 Phaseolus vulgaris
Phvul.006G064300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17451417-17461416 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305447 5265 Fabidae View MSA
124062546 5270 Rosid View MSA
123739764 5271 Pentapetalae View MSA
122789561 5272 Eudicot View MSA
122043998 5273 Angiosperm View MSA
121345653 5274 Embryophyte View MSA
123426004 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05449 0.0 3.55304    
cufflinks 3.33919 0.0 9.91696    
cufflinks 1.6766 0.0 5.38588    
cufflinks 2.06465 0.0 6.49657    
cufflinks 2.89953 0.0 8.78058    
cufflinks 2.9398 0.0 8.8627    
cufflinks 3.0157 0.0 9.04017    
cufflinks 3.18045 0.0 9.44793    
cufflinks 4.0675 0.0 11.8147    
cufflinks 0.204711 0.0 0.803968 Low Low
cufflinks 2.15373 0.0 6.74649    

0 Strain