Gene : Phvul.010G126300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  1268
Name:  ? Phvul.010G126300 Secondary Identifier:  ? PAC:37142900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G126300 0.5kb upstream 0.5kb upstream 8187 true Chr10: 40721937-40730123 Phaseolus vulgaris
Phvul.010G126300 0.5kb upstream 0.5kb upstream 500 false Chr10: 40729624-40730123 Phaseolus vulgaris
Phvul.010G126300 0.5kb downstream 0.5kb downstream 8187 true Chr10: 40721437-40729623 Phaseolus vulgaris
Phvul.010G126300 0.5kb downstream 0.5kb downstream 500 false Chr10: 40721437-40721936 Phaseolus vulgaris
Phvul.010G126300 1.0kb upstream 1.0kb upstream 8687 true Chr10: 40721937-40730623 Phaseolus vulgaris
Phvul.010G126300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40729624-40730623 Phaseolus vulgaris
Phvul.010G126300 1.0kb downstream 1.0kb downstream 8687 true Chr10: 40720937-40729623 Phaseolus vulgaris
Phvul.010G126300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40720937-40721936 Phaseolus vulgaris
Phvul.010G126300 2.0kb upstream 2.0kb upstream 9687 true Chr10: 40721937-40731623 Phaseolus vulgaris
Phvul.010G126300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40729624-40731623 Phaseolus vulgaris
Phvul.010G126300 2.0kb downstream 2.0kb downstream 9687 true Chr10: 40719937-40729623 Phaseolus vulgaris
Phvul.010G126300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40719937-40721936 Phaseolus vulgaris
Phvul.010G126300 5.0kb upstream 5.0kb upstream 12687 true Chr10: 40721937-40734623 Phaseolus vulgaris
Phvul.010G126300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40729624-40734623 Phaseolus vulgaris
Phvul.010G126300 5.0kb downstream 5.0kb downstream 12687 true Chr10: 40716937-40729623 Phaseolus vulgaris
Phvul.010G126300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40716937-40721936 Phaseolus vulgaris
Phvul.010G126300 10.0kb upstream 10.0kb upstream 17687 true Chr10: 40721937-40739623 Phaseolus vulgaris
Phvul.010G126300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40729624-40739623 Phaseolus vulgaris
Phvul.010G126300 10.0kb downstream 10.0kb downstream 17687 true Chr10: 40711937-40729623 Phaseolus vulgaris
Phvul.010G126300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40711937-40721936 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311279 5265 Fabidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.71231 0.0 9.82172   Low
cufflinks 12.6784 0.0 33.1677    
cufflinks 12.8784 0.0 33.7142    
cufflinks 4.97387 0.0 12.9935   Low
cufflinks 13.4865 0.0 35.3096    
cufflinks 18.1325 0.0 48.5845    
cufflinks 12.3181 0.0 32.2504    
cufflinks 9.00581 0.0 23.3261    
cufflinks 13.692 0.0 36.0241    
cufflinks 34.5822 0.0 98.8141   High
cufflinks 11.5927 0.0 30.1892    

0 Strain