Gene : Phvul.010G125900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1264
Name:  ? Phvul.010G125900 Secondary Identifier:  ? PAC:37143274
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G125900 0.5kb upstream 0.5kb upstream 1828 true Chr10: 40694467-40696294 Phaseolus vulgaris
Phvul.010G125900 0.5kb upstream 0.5kb upstream 500 false Chr10: 40695795-40696294 Phaseolus vulgaris
Phvul.010G125900 0.5kb downstream 0.5kb downstream 1828 true Chr10: 40693967-40695794 Phaseolus vulgaris
Phvul.010G125900 0.5kb downstream 0.5kb downstream 500 false Chr10: 40693967-40694466 Phaseolus vulgaris
Phvul.010G125900 1.0kb upstream 1.0kb upstream 2328 true Chr10: 40694467-40696794 Phaseolus vulgaris
Phvul.010G125900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40695795-40696794 Phaseolus vulgaris
Phvul.010G125900 1.0kb downstream 1.0kb downstream 2328 true Chr10: 40693467-40695794 Phaseolus vulgaris
Phvul.010G125900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40693467-40694466 Phaseolus vulgaris
Phvul.010G125900 2.0kb upstream 2.0kb upstream 3328 true Chr10: 40694467-40697794 Phaseolus vulgaris
Phvul.010G125900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40695795-40697794 Phaseolus vulgaris
Phvul.010G125900 2.0kb downstream 2.0kb downstream 3328 true Chr10: 40692467-40695794 Phaseolus vulgaris
Phvul.010G125900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40692467-40694466 Phaseolus vulgaris
Phvul.010G125900 5.0kb upstream 5.0kb upstream 6328 true Chr10: 40694467-40700794 Phaseolus vulgaris
Phvul.010G125900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40695795-40700794 Phaseolus vulgaris
Phvul.010G125900 5.0kb downstream 5.0kb downstream 6328 true Chr10: 40689467-40695794 Phaseolus vulgaris
Phvul.010G125900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40689467-40694466 Phaseolus vulgaris
Phvul.010G125900 10.0kb upstream 10.0kb upstream 11328 true Chr10: 40694467-40705794 Phaseolus vulgaris
Phvul.010G125900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40695795-40705794 Phaseolus vulgaris
Phvul.010G125900 10.0kb downstream 10.0kb downstream 11328 true Chr10: 40684467-40695794 Phaseolus vulgaris
Phvul.010G125900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40684467-40694466 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307926 5265 Fabidae View MSA
124050165 5270 Rosid View MSA
123752339 5271 Pentapetalae View MSA
122789611 5272 Eudicot View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2249 0.0 37.27   High
cufflinks 8.40915 0.0 24.9741    
cufflinks 9.34073 0.0 27.4019    
cufflinks 11.9108 0.0 34.3633    
cufflinks 9.092 0.0 27.0044    
cufflinks 6.25184 0.0 19.2325   Low
cufflinks 11.7636 0.0 33.6696    
cufflinks 11.5316 0.0 32.9561    
cufflinks 12.5407 0.0 35.7867    
cufflinks 11.2335 0.0 32.4124    
cufflinks 9.06133 0.0 26.8312    

0 Strain