Gene : Phvul.010G126000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1265
Name:  ? Phvul.010G126000 Secondary Identifier:  ? PAC:37142714
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G126000 0.5kb upstream 0.5kb upstream 5479 true Chr10: 40699326-40704804 Phaseolus vulgaris
Phvul.010G126000 0.5kb upstream 0.5kb upstream 500 false Chr10: 40704305-40704804 Phaseolus vulgaris
Phvul.010G126000 0.5kb downstream 0.5kb downstream 5479 true Chr10: 40698826-40704304 Phaseolus vulgaris
Phvul.010G126000 0.5kb downstream 0.5kb downstream 500 false Chr10: 40698826-40699325 Phaseolus vulgaris
Phvul.010G126000 1.0kb upstream 1.0kb upstream 5979 true Chr10: 40699326-40705304 Phaseolus vulgaris
Phvul.010G126000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40704305-40705304 Phaseolus vulgaris
Phvul.010G126000 1.0kb downstream 1.0kb downstream 5979 true Chr10: 40698326-40704304 Phaseolus vulgaris
Phvul.010G126000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40698326-40699325 Phaseolus vulgaris
Phvul.010G126000 2.0kb upstream 2.0kb upstream 6979 true Chr10: 40699326-40706304 Phaseolus vulgaris
Phvul.010G126000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40704305-40706304 Phaseolus vulgaris
Phvul.010G126000 2.0kb downstream 2.0kb downstream 6979 true Chr10: 40697326-40704304 Phaseolus vulgaris
Phvul.010G126000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40697326-40699325 Phaseolus vulgaris
Phvul.010G126000 5.0kb upstream 5.0kb upstream 9979 true Chr10: 40699326-40709304 Phaseolus vulgaris
Phvul.010G126000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40704305-40709304 Phaseolus vulgaris
Phvul.010G126000 5.0kb downstream 5.0kb downstream 9979 true Chr10: 40694326-40704304 Phaseolus vulgaris
Phvul.010G126000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40694326-40699325 Phaseolus vulgaris
Phvul.010G126000 10.0kb upstream 10.0kb upstream 14979 true Chr10: 40699326-40714304 Phaseolus vulgaris
Phvul.010G126000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40704305-40714304 Phaseolus vulgaris
Phvul.010G126000 10.0kb downstream 10.0kb downstream 14979 true Chr10: 40689326-40704304 Phaseolus vulgaris
Phvul.010G126000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40689326-40699325 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300389 5265 Fabidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.1841 0.0 65.7013    
cufflinks 23.4904 0.0 61.5527    
cufflinks 17.5924 0.0 46.8484   Low
cufflinks 31.2995 0.0 81.2497   High
cufflinks 21.1913 0.0 56.0456    
cufflinks 19.9734 0.0 52.8194    
cufflinks 20.2921 0.0 53.7039    
cufflinks 22.838 0.0 59.8424    
cufflinks 27.6349 0.0 72.0231   High
cufflinks 19.486 0.0 51.6058    
cufflinks 25.4606 0.0 66.6079    

0 Strain