Gene : Phvul.006G062700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15651:SF7 - ARMADILLO REPEAT-CONTAINING PROTEIN 8 Genomic Order:  599
Name:  ? Phvul.006G062700 Secondary Identifier:  ? PAC:37172030
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G062700 0.5kb upstream 0.5kb upstream 7899 true Chr06: 17163288-17171186 Phaseolus vulgaris
Phvul.006G062700 0.5kb upstream 0.5kb upstream 500 false Chr06: 17170687-17171186 Phaseolus vulgaris
Phvul.006G062700 0.5kb downstream 0.5kb downstream 7899 true Chr06: 17162788-17170686 Phaseolus vulgaris
Phvul.006G062700 0.5kb downstream 0.5kb downstream 500 false Chr06: 17162788-17163287 Phaseolus vulgaris
Phvul.006G062700 1.0kb upstream 1.0kb upstream 8399 true Chr06: 17163288-17171686 Phaseolus vulgaris
Phvul.006G062700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17170687-17171686 Phaseolus vulgaris
Phvul.006G062700 1.0kb downstream 1.0kb downstream 8399 true Chr06: 17162288-17170686 Phaseolus vulgaris
Phvul.006G062700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17162288-17163287 Phaseolus vulgaris
Phvul.006G062700 2.0kb upstream 2.0kb upstream 9399 true Chr06: 17163288-17172686 Phaseolus vulgaris
Phvul.006G062700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17170687-17172686 Phaseolus vulgaris
Phvul.006G062700 2.0kb downstream 2.0kb downstream 9399 true Chr06: 17161288-17170686 Phaseolus vulgaris
Phvul.006G062700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17161288-17163287 Phaseolus vulgaris
Phvul.006G062700 5.0kb upstream 5.0kb upstream 12399 true Chr06: 17163288-17175686 Phaseolus vulgaris
Phvul.006G062700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17170687-17175686 Phaseolus vulgaris
Phvul.006G062700 5.0kb downstream 5.0kb downstream 12399 true Chr06: 17158288-17170686 Phaseolus vulgaris
Phvul.006G062700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17158288-17163287 Phaseolus vulgaris
Phvul.006G062700 10.0kb upstream 10.0kb upstream 17399 true Chr06: 17163288-17180686 Phaseolus vulgaris
Phvul.006G062700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17170687-17180686 Phaseolus vulgaris
Phvul.006G062700 10.0kb downstream 10.0kb downstream 17399 true Chr06: 17153288-17170686 Phaseolus vulgaris
Phvul.006G062700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17153288-17163287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311468 5265 Fabidae View MSA
124062795 5270 Rosid View MSA
123736458 5271 Pentapetalae View MSA
122790429 5272 Eudicot View MSA
122044993 5273 Angiosperm View MSA
121345703 5274 Embryophyte View MSA
123424195 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.87592 0.0 8.32482   Low
cufflinks 3.88276 0.0 10.9568    
cufflinks 5.35629 0.0 14.6427    
cufflinks 3.55559 0.0 10.155    
cufflinks 7.93943 0.0 21.117   High
cufflinks 3.7875 0.0 10.7182    
cufflinks 4.32522 0.0 12.1136    
cufflinks 4.38201 0.0 12.1995    
cufflinks 5.63082 0.0 15.4732    
cufflinks 8.90604 0.0 23.4598   High
cufflinks 5.98844 0.0 16.3099    

0 Strain