Gene : Phvul.010G123500 P. vulgaris v2.1
Defline:  (1 of 4) 2.7.1.150 - 1-phosphatidylinositol-3-phosphate 5-kinase / Type III PIP kinase Genomic Order:  1241
Name:  ? Phvul.010G123500 Secondary Identifier:  ? PAC:37143720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6352 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G123500 0.5kb upstream 0.5kb upstream 10342 true Chr10: 40451662-40462003 Phaseolus vulgaris
Phvul.010G123500 0.5kb upstream 0.5kb upstream 500 false Chr10: 40461504-40462003 Phaseolus vulgaris
Phvul.010G123500 0.5kb downstream 0.5kb downstream 10342 true Chr10: 40451162-40461503 Phaseolus vulgaris
Phvul.010G123500 0.5kb downstream 0.5kb downstream 500 false Chr10: 40451162-40451661 Phaseolus vulgaris
Phvul.010G123500 1.0kb upstream 1.0kb upstream 10842 true Chr10: 40451662-40462503 Phaseolus vulgaris
Phvul.010G123500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40461504-40462503 Phaseolus vulgaris
Phvul.010G123500 1.0kb downstream 1.0kb downstream 10842 true Chr10: 40450662-40461503 Phaseolus vulgaris
Phvul.010G123500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40450662-40451661 Phaseolus vulgaris
Phvul.010G123500 2.0kb upstream 2.0kb upstream 11842 true Chr10: 40451662-40463503 Phaseolus vulgaris
Phvul.010G123500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40461504-40463503 Phaseolus vulgaris
Phvul.010G123500 2.0kb downstream 2.0kb downstream 11842 true Chr10: 40449662-40461503 Phaseolus vulgaris
Phvul.010G123500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40449662-40451661 Phaseolus vulgaris
Phvul.010G123500 5.0kb upstream 5.0kb upstream 14842 true Chr10: 40451662-40466503 Phaseolus vulgaris
Phvul.010G123500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40461504-40466503 Phaseolus vulgaris
Phvul.010G123500 5.0kb downstream 5.0kb downstream 14842 true Chr10: 40446662-40461503 Phaseolus vulgaris
Phvul.010G123500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40446662-40451661 Phaseolus vulgaris
Phvul.010G123500 10.0kb upstream 10.0kb upstream 19842 true Chr10: 40451662-40471503 Phaseolus vulgaris
Phvul.010G123500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40461504-40471503 Phaseolus vulgaris
Phvul.010G123500 10.0kb downstream 10.0kb downstream 19842 true Chr10: 40441662-40461503 Phaseolus vulgaris
Phvul.010G123500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40441662-40451661 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301850 5265 Fabidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13636 0.0 10.7601   Low
cufflinks 4.14806 0.0 10.8025   Low
cufflinks 10.1543 0.0 26.578    
cufflinks 4.11037 0.0 10.7533   Low
cufflinks 7.18492 0.0 18.5759    
cufflinks 10.5563 0.0 27.6513    
cufflinks 10.0522 0.0 26.2592    
cufflinks 6.12897 0.0 15.8435    
cufflinks 11.6788 0.0 30.6838    
cufflinks 18.273 0.0 49.7993   High
cufflinks 5.76487 0.0 14.9138    

0 Strain