Gene : Phvul.010G125000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11200:SF122 - PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  1255
Name:  ? Phvul.010G125000 Secondary Identifier:  ? PAC:37144138
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G125000 0.5kb upstream 0.5kb upstream 11570 true Chr10: 40617520-40629089 Phaseolus vulgaris
Phvul.010G125000 0.5kb upstream 0.5kb upstream 500 false Chr10: 40617520-40618019 Phaseolus vulgaris
Phvul.010G125000 0.5kb downstream 0.5kb downstream 11570 true Chr10: 40618020-40629589 Phaseolus vulgaris
Phvul.010G125000 0.5kb downstream 0.5kb downstream 500 false Chr10: 40629090-40629589 Phaseolus vulgaris
Phvul.010G125000 1.0kb upstream 1.0kb upstream 12070 true Chr10: 40617020-40629089 Phaseolus vulgaris
Phvul.010G125000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40617020-40618019 Phaseolus vulgaris
Phvul.010G125000 1.0kb downstream 1.0kb downstream 12070 true Chr10: 40618020-40630089 Phaseolus vulgaris
Phvul.010G125000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40629090-40630089 Phaseolus vulgaris
Phvul.010G125000 2.0kb upstream 2.0kb upstream 13070 true Chr10: 40616020-40629089 Phaseolus vulgaris
Phvul.010G125000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40616020-40618019 Phaseolus vulgaris
Phvul.010G125000 2.0kb downstream 2.0kb downstream 13070 true Chr10: 40618020-40631089 Phaseolus vulgaris
Phvul.010G125000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40629090-40631089 Phaseolus vulgaris
Phvul.010G125000 5.0kb upstream 5.0kb upstream 16070 true Chr10: 40613020-40629089 Phaseolus vulgaris
Phvul.010G125000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40613020-40618019 Phaseolus vulgaris
Phvul.010G125000 5.0kb downstream 5.0kb downstream 16070 true Chr10: 40618020-40634089 Phaseolus vulgaris
Phvul.010G125000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40629090-40634089 Phaseolus vulgaris
Phvul.010G125000 10.0kb upstream 10.0kb upstream 21070 true Chr10: 40608020-40629089 Phaseolus vulgaris
Phvul.010G125000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40608020-40618019 Phaseolus vulgaris
Phvul.010G125000 10.0kb downstream 10.0kb downstream 21070 true Chr10: 40618020-40639089 Phaseolus vulgaris
Phvul.010G125000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40629090-40639089 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122316085 5265 Fabidae View MSA
124064619 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.56694 0.0 19.7816    
cufflinks 6.02989 0.0 16.0014    
cufflinks 7.94727 0.0 20.7268    
cufflinks 3.80351 0.0 10.5581   Low
cufflinks 9.02692 0.0 23.5327    
cufflinks 4.79554 0.0 12.9452   Low
cufflinks 12.3093 0.0 31.8216    
cufflinks 9.83989 0.0 25.4868    
cufflinks 14.1947 0.0 36.6967   High
cufflinks 18.1206 0.0 47.0879   High
cufflinks 6.83482 0.0 18.0697    

0 Strain