Gene : Phvul.006G063800 P. vulgaris v2.1
Genomic Order:  615 Name:  ? Phvul.006G063800
Secondary Identifier:  ? PAC:37173665
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G063800 0.5kb upstream 0.5kb upstream 2852 true Chr06: 17356295-17359146 Phaseolus vulgaris
Phvul.006G063800 0.5kb upstream 0.5kb upstream 500 false Chr06: 17356295-17356794 Phaseolus vulgaris
Phvul.006G063800 0.5kb downstream 0.5kb downstream 2852 true Chr06: 17356795-17359646 Phaseolus vulgaris
Phvul.006G063800 0.5kb downstream 0.5kb downstream 500 false Chr06: 17359147-17359646 Phaseolus vulgaris
Phvul.006G063800 1.0kb upstream 1.0kb upstream 3352 true Chr06: 17355795-17359146 Phaseolus vulgaris
Phvul.006G063800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17355795-17356794 Phaseolus vulgaris
Phvul.006G063800 1.0kb downstream 1.0kb downstream 3352 true Chr06: 17356795-17360146 Phaseolus vulgaris
Phvul.006G063800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17359147-17360146 Phaseolus vulgaris
Phvul.006G063800 2.0kb upstream 2.0kb upstream 4352 true Chr06: 17354795-17359146 Phaseolus vulgaris
Phvul.006G063800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17354795-17356794 Phaseolus vulgaris
Phvul.006G063800 2.0kb downstream 2.0kb downstream 4352 true Chr06: 17356795-17361146 Phaseolus vulgaris
Phvul.006G063800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17359147-17361146 Phaseolus vulgaris
Phvul.006G063800 5.0kb upstream 5.0kb upstream 7352 true Chr06: 17351795-17359146 Phaseolus vulgaris
Phvul.006G063800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17351795-17356794 Phaseolus vulgaris
Phvul.006G063800 5.0kb downstream 5.0kb downstream 7352 true Chr06: 17356795-17364146 Phaseolus vulgaris
Phvul.006G063800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17359147-17364146 Phaseolus vulgaris
Phvul.006G063800 10.0kb upstream 10.0kb upstream 12352 true Chr06: 17346795-17359146 Phaseolus vulgaris
Phvul.006G063800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17346795-17356794 Phaseolus vulgaris
Phvul.006G063800 10.0kb downstream 10.0kb downstream 12352 true Chr06: 17356795-17369146 Phaseolus vulgaris
Phvul.006G063800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17359147-17369146 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300686 5265 Fabidae View MSA
124070606 5270 Rosid View MSA
123741375 5271 Pentapetalae View MSA
122793550 5272 Eudicot View MSA
122048217 5273 Angiosperm View MSA
121345828 5274 Embryophyte View MSA
123380277 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 161.41 0.0 439.545 High High
cufflinks 42.6443 0.0 110.537 High  
cufflinks 90.7091 0.0 237.562 High  
cufflinks 83.472 0.0 217.1 High  
cufflinks 19.3877 0.0 53.0595    
cufflinks 25.8478 0.0 68.5376    
cufflinks 3.03256 0.0 9.98987   Low
cufflinks 0.792175 0.0 2.96906   Low
cufflinks 1.34049 0.0 4.81634   Low
cufflinks 27.4215 0.0 72.6517    
cufflinks 23.4552 0.0 62.9508    

0 Strain