Gene : Phvul.006G066600 P. vulgaris v2.1
Defline:  (1 of 4) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  647
Name:  ? Phvul.006G066600 Secondary Identifier:  ? PAC:37171917
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G066600 0.5kb upstream 0.5kb upstream 4595 true Chr06: 17762414-17767008 Phaseolus vulgaris
Phvul.006G066600 0.5kb upstream 0.5kb upstream 500 false Chr06: 17766509-17767008 Phaseolus vulgaris
Phvul.006G066600 0.5kb downstream 0.5kb downstream 4595 true Chr06: 17761914-17766508 Phaseolus vulgaris
Phvul.006G066600 0.5kb downstream 0.5kb downstream 500 false Chr06: 17761914-17762413 Phaseolus vulgaris
Phvul.006G066600 1.0kb upstream 1.0kb upstream 5095 true Chr06: 17762414-17767508 Phaseolus vulgaris
Phvul.006G066600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17766509-17767508 Phaseolus vulgaris
Phvul.006G066600 1.0kb downstream 1.0kb downstream 5095 true Chr06: 17761414-17766508 Phaseolus vulgaris
Phvul.006G066600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17761414-17762413 Phaseolus vulgaris
Phvul.006G066600 2.0kb upstream 2.0kb upstream 6095 true Chr06: 17762414-17768508 Phaseolus vulgaris
Phvul.006G066600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17766509-17768508 Phaseolus vulgaris
Phvul.006G066600 2.0kb downstream 2.0kb downstream 6095 true Chr06: 17760414-17766508 Phaseolus vulgaris
Phvul.006G066600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17760414-17762413 Phaseolus vulgaris
Phvul.006G066600 5.0kb upstream 5.0kb upstream 9095 true Chr06: 17762414-17771508 Phaseolus vulgaris
Phvul.006G066600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17766509-17771508 Phaseolus vulgaris
Phvul.006G066600 5.0kb downstream 5.0kb downstream 9095 true Chr06: 17757414-17766508 Phaseolus vulgaris
Phvul.006G066600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17757414-17762413 Phaseolus vulgaris
Phvul.006G066600 10.0kb upstream 10.0kb upstream 14095 true Chr06: 17762414-17776508 Phaseolus vulgaris
Phvul.006G066600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17766509-17776508 Phaseolus vulgaris
Phvul.006G066600 10.0kb downstream 10.0kb downstream 14095 true Chr06: 17752414-17766508 Phaseolus vulgaris
Phvul.006G066600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17752414-17762413 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308644 5265 Fabidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.5001 0.0 186.187 High High
cufflinks 28.8038 0.0 74.765    
cufflinks 27.9259 0.0 72.4061    
cufflinks 21.8024 0.0 56.3831    
cufflinks 37.0361 0.0 97.4622 High  
cufflinks 24.1413 0.0 62.4513    
cufflinks 23.195 0.0 60.0396    
cufflinks 13.6002 0.0 35.4279   Low
cufflinks 20.8339 0.0 53.8587    
cufflinks 98.5503 0.0 281.993 High High
cufflinks 45.5591 0.0 121.402 High  

0 Strain