Gene : Phvul.010G126700 P. vulgaris v2.1
Defline:  (1 of 123) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1272
Name:  ? Phvul.010G126700 Secondary Identifier:  ? PAC:37142081
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G126700 0.5kb upstream 0.5kb upstream 4680 true Chr10: 40749228-40753907 Phaseolus vulgaris
Phvul.010G126700 0.5kb upstream 0.5kb upstream 500 false Chr10: 40753408-40753907 Phaseolus vulgaris
Phvul.010G126700 0.5kb downstream 0.5kb downstream 4680 true Chr10: 40748728-40753407 Phaseolus vulgaris
Phvul.010G126700 0.5kb downstream 0.5kb downstream 500 false Chr10: 40748728-40749227 Phaseolus vulgaris
Phvul.010G126700 1.0kb upstream 1.0kb upstream 5180 true Chr10: 40749228-40754407 Phaseolus vulgaris
Phvul.010G126700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40753408-40754407 Phaseolus vulgaris
Phvul.010G126700 1.0kb downstream 1.0kb downstream 5180 true Chr10: 40748228-40753407 Phaseolus vulgaris
Phvul.010G126700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40748228-40749227 Phaseolus vulgaris
Phvul.010G126700 2.0kb upstream 2.0kb upstream 6180 true Chr10: 40749228-40755407 Phaseolus vulgaris
Phvul.010G126700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40753408-40755407 Phaseolus vulgaris
Phvul.010G126700 2.0kb downstream 2.0kb downstream 6180 true Chr10: 40747228-40753407 Phaseolus vulgaris
Phvul.010G126700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40747228-40749227 Phaseolus vulgaris
Phvul.010G126700 5.0kb upstream 5.0kb upstream 9180 true Chr10: 40749228-40758407 Phaseolus vulgaris
Phvul.010G126700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40753408-40758407 Phaseolus vulgaris
Phvul.010G126700 5.0kb downstream 5.0kb downstream 9180 true Chr10: 40744228-40753407 Phaseolus vulgaris
Phvul.010G126700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40744228-40749227 Phaseolus vulgaris
Phvul.010G126700 10.0kb upstream 10.0kb upstream 14180 true Chr10: 40749228-40763407 Phaseolus vulgaris
Phvul.010G126700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40753408-40763407 Phaseolus vulgaris
Phvul.010G126700 10.0kb downstream 10.0kb downstream 14180 true Chr10: 40739228-40753407 Phaseolus vulgaris
Phvul.010G126700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40739228-40749227 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303206 5265 Fabidae View MSA
124065147 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.41464 0.0 49.3865    
cufflinks 15.2222 0.0 73.2112    
cufflinks 34.2342 0.0 151.398    
cufflinks 9.01123 0.0 41.967    
cufflinks 17.9837 0.0 84.1141    
cufflinks 61.8385 0.0 290.567 High High
cufflinks 20.8483 0.0 92.8435    
cufflinks 28.9256 0.0 131.188 High  
cufflinks 18.2841 0.0 81.1722    
cufflinks 3.90751 0.0 25.707   Low
cufflinks 22.9443 0.0 94.2352    

0 Strain