Gene : Phvul.006G068800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23244:SF249 - MANNOSE-BINDING LECTIN SUPERFAMILY PROTEIN Genomic Order:  672
Name:  ? Phvul.006G068800 Secondary Identifier:  ? PAC:37171615
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G068800 0.5kb upstream 0.5kb upstream 4535 true Chr06: 18080616-18085150 Phaseolus vulgaris
Phvul.006G068800 0.5kb upstream 0.5kb upstream 500 false Chr06: 18080616-18081115 Phaseolus vulgaris
Phvul.006G068800 0.5kb downstream 0.5kb downstream 4535 true Chr06: 18081116-18085650 Phaseolus vulgaris
Phvul.006G068800 0.5kb downstream 0.5kb downstream 500 false Chr06: 18085151-18085650 Phaseolus vulgaris
Phvul.006G068800 1.0kb upstream 1.0kb upstream 5035 true Chr06: 18080116-18085150 Phaseolus vulgaris
Phvul.006G068800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18080116-18081115 Phaseolus vulgaris
Phvul.006G068800 1.0kb downstream 1.0kb downstream 5035 true Chr06: 18081116-18086150 Phaseolus vulgaris
Phvul.006G068800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18085151-18086150 Phaseolus vulgaris
Phvul.006G068800 2.0kb upstream 2.0kb upstream 6035 true Chr06: 18079116-18085150 Phaseolus vulgaris
Phvul.006G068800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18079116-18081115 Phaseolus vulgaris
Phvul.006G068800 2.0kb downstream 2.0kb downstream 6035 true Chr06: 18081116-18087150 Phaseolus vulgaris
Phvul.006G068800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18085151-18087150 Phaseolus vulgaris
Phvul.006G068800 5.0kb upstream 5.0kb upstream 9035 true Chr06: 18076116-18085150 Phaseolus vulgaris
Phvul.006G068800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18076116-18081115 Phaseolus vulgaris
Phvul.006G068800 5.0kb downstream 5.0kb downstream 9035 true Chr06: 18081116-18090150 Phaseolus vulgaris
Phvul.006G068800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18085151-18090150 Phaseolus vulgaris
Phvul.006G068800 10.0kb upstream 10.0kb upstream 14035 true Chr06: 18071116-18085150 Phaseolus vulgaris
Phvul.006G068800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18071116-18081115 Phaseolus vulgaris
Phvul.006G068800 10.0kb downstream 10.0kb downstream 14035 true Chr06: 18081116-18095150 Phaseolus vulgaris
Phvul.006G068800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18085151-18095150 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310939 5265 Fabidae View MSA
124064423 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30459 0.0 19.8227   High
cufflinks 1.27752 0.0 4.15699    
cufflinks 3.24643 0.0 9.47374    
cufflinks 1.8295 0.0 5.79789    
cufflinks 3.10289 0.0 9.23427    
cufflinks 0.375843 0.0 1.38761 Low Low
cufflinks 6.55639 0.0 17.9142    
cufflinks 1.44743 0.0 4.61361    
cufflinks 0.487169 0.0 1.76199 Low Low
cufflinks 3.76506 0.0 10.8635    
cufflinks 9.01556 0.0 24.1377   High

0 Strain