Gene : Phvul.010G131400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  1319
Name:  ? Phvul.010G131400 Secondary Identifier:  ? PAC:37144154
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G131400 0.5kb upstream 0.5kb upstream 7107 true Chr10: 41271586-41278692 Phaseolus vulgaris
Phvul.010G131400 0.5kb upstream 0.5kb upstream 500 false Chr10: 41278193-41278692 Phaseolus vulgaris
Phvul.010G131400 0.5kb downstream 0.5kb downstream 7107 true Chr10: 41271086-41278192 Phaseolus vulgaris
Phvul.010G131400 0.5kb downstream 0.5kb downstream 500 false Chr10: 41271086-41271585 Phaseolus vulgaris
Phvul.010G131400 1.0kb upstream 1.0kb upstream 7607 true Chr10: 41271586-41279192 Phaseolus vulgaris
Phvul.010G131400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41278193-41279192 Phaseolus vulgaris
Phvul.010G131400 1.0kb downstream 1.0kb downstream 7607 true Chr10: 41270586-41278192 Phaseolus vulgaris
Phvul.010G131400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41270586-41271585 Phaseolus vulgaris
Phvul.010G131400 2.0kb upstream 2.0kb upstream 8607 true Chr10: 41271586-41280192 Phaseolus vulgaris
Phvul.010G131400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41278193-41280192 Phaseolus vulgaris
Phvul.010G131400 2.0kb downstream 2.0kb downstream 8607 true Chr10: 41269586-41278192 Phaseolus vulgaris
Phvul.010G131400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41269586-41271585 Phaseolus vulgaris
Phvul.010G131400 5.0kb upstream 5.0kb upstream 11607 true Chr10: 41271586-41283192 Phaseolus vulgaris
Phvul.010G131400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41278193-41283192 Phaseolus vulgaris
Phvul.010G131400 5.0kb downstream 5.0kb downstream 11607 true Chr10: 41266586-41278192 Phaseolus vulgaris
Phvul.010G131400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41266586-41271585 Phaseolus vulgaris
Phvul.010G131400 10.0kb upstream 10.0kb upstream 16607 true Chr10: 41271586-41288192 Phaseolus vulgaris
Phvul.010G131400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41278193-41288192 Phaseolus vulgaris
Phvul.010G131400 10.0kb downstream 10.0kb downstream 16607 true Chr10: 41261586-41278192 Phaseolus vulgaris
Phvul.010G131400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41261586-41271585 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308563 5265 Fabidae View MSA
124061716 5270 Rosid View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.59974 0.0 17.3094   Low
cufflinks 8.49865 0.0 29.3449    
cufflinks 14.1191 0.0 51.3159   High
cufflinks 4.55399 0.0 22.2218   Low
cufflinks 7.13148 0.0 22.1073    
cufflinks 11.4616 0.0 41.2062    
cufflinks 8.99005 0.0 29.7994    
cufflinks 13.8857 0.0 45.4149   High
cufflinks 7.59871 0.0 26.2661    
cufflinks 12.7951 0.0 41.8212   High
cufflinks 6.43455 0.0 23.0775    

0 Strain