Gene : Phvul.006G068600 P. vulgaris v2.1
Defline:  (1 of 4) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  670
Name:  ? Phvul.006G068600 Secondary Identifier:  ? PAC:37174198
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G068600 0.5kb upstream 0.5kb upstream 3031 true Chr06: 18047861-18050891 Phaseolus vulgaris
Phvul.006G068600 0.5kb upstream 0.5kb upstream 500 false Chr06: 18050392-18050891 Phaseolus vulgaris
Phvul.006G068600 0.5kb downstream 0.5kb downstream 3031 true Chr06: 18047361-18050391 Phaseolus vulgaris
Phvul.006G068600 0.5kb downstream 0.5kb downstream 500 false Chr06: 18047361-18047860 Phaseolus vulgaris
Phvul.006G068600 1.0kb upstream 1.0kb upstream 3531 true Chr06: 18047861-18051391 Phaseolus vulgaris
Phvul.006G068600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18050392-18051391 Phaseolus vulgaris
Phvul.006G068600 1.0kb downstream 1.0kb downstream 3531 true Chr06: 18046861-18050391 Phaseolus vulgaris
Phvul.006G068600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18046861-18047860 Phaseolus vulgaris
Phvul.006G068600 2.0kb upstream 2.0kb upstream 4531 true Chr06: 18047861-18052391 Phaseolus vulgaris
Phvul.006G068600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18050392-18052391 Phaseolus vulgaris
Phvul.006G068600 2.0kb downstream 2.0kb downstream 4531 true Chr06: 18045861-18050391 Phaseolus vulgaris
Phvul.006G068600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18045861-18047860 Phaseolus vulgaris
Phvul.006G068600 5.0kb upstream 5.0kb upstream 7531 true Chr06: 18047861-18055391 Phaseolus vulgaris
Phvul.006G068600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18050392-18055391 Phaseolus vulgaris
Phvul.006G068600 5.0kb downstream 5.0kb downstream 7531 true Chr06: 18042861-18050391 Phaseolus vulgaris
Phvul.006G068600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18042861-18047860 Phaseolus vulgaris
Phvul.006G068600 10.0kb upstream 10.0kb upstream 12531 true Chr06: 18047861-18060391 Phaseolus vulgaris
Phvul.006G068600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18050392-18060391 Phaseolus vulgaris
Phvul.006G068600 10.0kb downstream 10.0kb downstream 12531 true Chr06: 18037861-18050391 Phaseolus vulgaris
Phvul.006G068600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18037861-18047860 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.1094 0.0 138.726 High  
cufflinks 13.3956 0.0 35.8783    
cufflinks 63.0572 0.0 166.551 High High
cufflinks 47.7805 0.0 124.168 High  
cufflinks 5.97685 0.0 17.3308    
cufflinks 67.2563 0.0 178.277 High High
cufflinks 2.83327 0.0 8.87946    
cufflinks 2.62832 0.0 8.27419    
cufflinks 0.681063 0.0 2.48952   Low
cufflinks 11.909 0.0 32.2588    
cufflinks 12.7964 0.0 34.5096    

0 Strain