Gene : Phvul.006G069100 P. vulgaris v2.1
Defline:  (1 of 1) PF00628//PF05641//PF16135 - PHD-finger (PHD) // Agenet domain (Agenet) // TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  675
Name:  ? Phvul.006G069100 Secondary Identifier:  ? PAC:37173260
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G069100 0.5kb upstream 0.5kb upstream 8496 true Chr06: 18095681-18104176 Phaseolus vulgaris
Phvul.006G069100 0.5kb upstream 0.5kb upstream 500 false Chr06: 18095681-18096180 Phaseolus vulgaris
Phvul.006G069100 0.5kb downstream 0.5kb downstream 8496 true Chr06: 18096181-18104676 Phaseolus vulgaris
Phvul.006G069100 0.5kb downstream 0.5kb downstream 500 false Chr06: 18104177-18104676 Phaseolus vulgaris
Phvul.006G069100 1.0kb upstream 1.0kb upstream 8996 true Chr06: 18095181-18104176 Phaseolus vulgaris
Phvul.006G069100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18095181-18096180 Phaseolus vulgaris
Phvul.006G069100 1.0kb downstream 1.0kb downstream 8996 true Chr06: 18096181-18105176 Phaseolus vulgaris
Phvul.006G069100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18104177-18105176 Phaseolus vulgaris
Phvul.006G069100 2.0kb upstream 2.0kb upstream 9996 true Chr06: 18094181-18104176 Phaseolus vulgaris
Phvul.006G069100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18094181-18096180 Phaseolus vulgaris
Phvul.006G069100 2.0kb downstream 2.0kb downstream 9996 true Chr06: 18096181-18106176 Phaseolus vulgaris
Phvul.006G069100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18104177-18106176 Phaseolus vulgaris
Phvul.006G069100 5.0kb upstream 5.0kb upstream 12996 true Chr06: 18091181-18104176 Phaseolus vulgaris
Phvul.006G069100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18091181-18096180 Phaseolus vulgaris
Phvul.006G069100 5.0kb downstream 5.0kb downstream 12996 true Chr06: 18096181-18109176 Phaseolus vulgaris
Phvul.006G069100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18104177-18109176 Phaseolus vulgaris
Phvul.006G069100 10.0kb upstream 10.0kb upstream 17996 true Chr06: 18086181-18104176 Phaseolus vulgaris
Phvul.006G069100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18086181-18096180 Phaseolus vulgaris
Phvul.006G069100 10.0kb downstream 10.0kb downstream 17996 true Chr06: 18096181-18114176 Phaseolus vulgaris
Phvul.006G069100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18104177-18114176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312419 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0264515 0.0 0.116925 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0184946 0.0 0.0859099 Low  
cufflinks 0.0321356 0.0 0.140749 Low  
cufflinks 0.148277 0.0 0.567176 Low High
cufflinks 0.0100185 0.0 0.0490658 Low Low
cufflinks 0.0208464 0.0 0.09389 Low  
cufflinks 0.0224968 0.0 0.101651 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0760177 0.0 0.30824 Low High

0 Strain