Gene : Phvul.006G067900 P. vulgaris v2.1
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  663
Name:  ? Phvul.006G067900 Secondary Identifier:  ? PAC:37171893
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G067900 0.5kb upstream 0.5kb upstream 3799 true Chr06: 17933066-17936864 Phaseolus vulgaris
Phvul.006G067900 0.5kb upstream 0.5kb upstream 500 false Chr06: 17936365-17936864 Phaseolus vulgaris
Phvul.006G067900 0.5kb downstream 0.5kb downstream 3799 true Chr06: 17932566-17936364 Phaseolus vulgaris
Phvul.006G067900 0.5kb downstream 0.5kb downstream 500 false Chr06: 17932566-17933065 Phaseolus vulgaris
Phvul.006G067900 1.0kb upstream 1.0kb upstream 4299 true Chr06: 17933066-17937364 Phaseolus vulgaris
Phvul.006G067900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17936365-17937364 Phaseolus vulgaris
Phvul.006G067900 1.0kb downstream 1.0kb downstream 4299 true Chr06: 17932066-17936364 Phaseolus vulgaris
Phvul.006G067900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17932066-17933065 Phaseolus vulgaris
Phvul.006G067900 2.0kb upstream 2.0kb upstream 5299 true Chr06: 17933066-17938364 Phaseolus vulgaris
Phvul.006G067900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17936365-17938364 Phaseolus vulgaris
Phvul.006G067900 2.0kb downstream 2.0kb downstream 5299 true Chr06: 17931066-17936364 Phaseolus vulgaris
Phvul.006G067900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17931066-17933065 Phaseolus vulgaris
Phvul.006G067900 5.0kb upstream 5.0kb upstream 8299 true Chr06: 17933066-17941364 Phaseolus vulgaris
Phvul.006G067900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17936365-17941364 Phaseolus vulgaris
Phvul.006G067900 5.0kb downstream 5.0kb downstream 8299 true Chr06: 17928066-17936364 Phaseolus vulgaris
Phvul.006G067900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17928066-17933065 Phaseolus vulgaris
Phvul.006G067900 10.0kb upstream 10.0kb upstream 13299 true Chr06: 17933066-17946364 Phaseolus vulgaris
Phvul.006G067900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17936365-17946364 Phaseolus vulgaris
Phvul.006G067900 10.0kb downstream 10.0kb downstream 13299 true Chr06: 17923066-17936364 Phaseolus vulgaris
Phvul.006G067900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17923066-17933065 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309507 5265 Fabidae View MSA
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023816 0.0 0.118032 Low Low
cufflinks 0.654238 0.0 2.40479    
cufflinks 0.278501 0.0 1.0922 Low  
cufflinks 0.0937625 0.0 0.406597 Low Low
cufflinks 0.626958 0.0 2.32234 Low  
cufflinks 4.70134 0.0 13.9437    
cufflinks 5.0147 0.0 14.8394   High
cufflinks 6.6861 0.0 19.0511   High
cufflinks 4.45306 0.0 13.395    
cufflinks 0.202155 0.0 0.816749 Low  
cufflinks 1.73283 0.0 5.80443    

0 Strain