Gene : Phvul.006G068200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  666
Name:  ? Phvul.006G068200 Secondary Identifier:  ? PAC:37172880
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G068200 0.5kb upstream 0.5kb upstream 3370 true Chr06: 17960338-17963707 Phaseolus vulgaris
Phvul.006G068200 0.5kb upstream 0.5kb upstream 500 false Chr06: 17963208-17963707 Phaseolus vulgaris
Phvul.006G068200 0.5kb downstream 0.5kb downstream 3370 true Chr06: 17959838-17963207 Phaseolus vulgaris
Phvul.006G068200 0.5kb downstream 0.5kb downstream 500 false Chr06: 17959838-17960337 Phaseolus vulgaris
Phvul.006G068200 1.0kb upstream 1.0kb upstream 3870 true Chr06: 17960338-17964207 Phaseolus vulgaris
Phvul.006G068200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17963208-17964207 Phaseolus vulgaris
Phvul.006G068200 1.0kb downstream 1.0kb downstream 3870 true Chr06: 17959338-17963207 Phaseolus vulgaris
Phvul.006G068200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17959338-17960337 Phaseolus vulgaris
Phvul.006G068200 2.0kb upstream 2.0kb upstream 4870 true Chr06: 17960338-17965207 Phaseolus vulgaris
Phvul.006G068200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17963208-17965207 Phaseolus vulgaris
Phvul.006G068200 2.0kb downstream 2.0kb downstream 4870 true Chr06: 17958338-17963207 Phaseolus vulgaris
Phvul.006G068200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17958338-17960337 Phaseolus vulgaris
Phvul.006G068200 5.0kb upstream 5.0kb upstream 7870 true Chr06: 17960338-17968207 Phaseolus vulgaris
Phvul.006G068200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17963208-17968207 Phaseolus vulgaris
Phvul.006G068200 5.0kb downstream 5.0kb downstream 7870 true Chr06: 17955338-17963207 Phaseolus vulgaris
Phvul.006G068200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17955338-17960337 Phaseolus vulgaris
Phvul.006G068200 10.0kb upstream 10.0kb upstream 12870 true Chr06: 17960338-17973207 Phaseolus vulgaris
Phvul.006G068200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17963208-17973207 Phaseolus vulgaris
Phvul.006G068200 10.0kb downstream 10.0kb downstream 12870 true Chr06: 17950338-17963207 Phaseolus vulgaris
Phvul.006G068200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17950338-17960337 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307029 5265 Fabidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 177.565 0.0 500.21 High  
cufflinks 256.723 0.0 754.214 High High
cufflinks 110.344 0.0 295.583 High Low
cufflinks 309.935 0.0 927.523 High High
cufflinks 189.991 0.0 531.713 High  
cufflinks 108.783 0.0 291.428 High Low
cufflinks 129.6 0.0 352.418 High  
cufflinks 117.31 0.0 316.543 High  
cufflinks 170.809 0.0 477.645 High  
cufflinks 138.135 0.0 377.83 High  
cufflinks 209.524 0.0 596.602 High  

0 Strain