Gene : Phvul.006G071700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  700
Name:  ? Phvul.006G071700 Secondary Identifier:  ? PAC:37173265
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G071700 0.5kb upstream 0.5kb upstream 1715 true Chr06: 18417376-18419090 Phaseolus vulgaris
Phvul.006G071700 0.5kb upstream 0.5kb upstream 500 false Chr06: 18418591-18419090 Phaseolus vulgaris
Phvul.006G071700 0.5kb downstream 0.5kb downstream 1715 true Chr06: 18416876-18418590 Phaseolus vulgaris
Phvul.006G071700 0.5kb downstream 0.5kb downstream 500 false Chr06: 18416876-18417375 Phaseolus vulgaris
Phvul.006G071700 1.0kb upstream 1.0kb upstream 2215 true Chr06: 18417376-18419590 Phaseolus vulgaris
Phvul.006G071700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18418591-18419590 Phaseolus vulgaris
Phvul.006G071700 1.0kb downstream 1.0kb downstream 2215 true Chr06: 18416376-18418590 Phaseolus vulgaris
Phvul.006G071700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18416376-18417375 Phaseolus vulgaris
Phvul.006G071700 2.0kb upstream 2.0kb upstream 3215 true Chr06: 18417376-18420590 Phaseolus vulgaris
Phvul.006G071700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18418591-18420590 Phaseolus vulgaris
Phvul.006G071700 2.0kb downstream 2.0kb downstream 3215 true Chr06: 18415376-18418590 Phaseolus vulgaris
Phvul.006G071700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18415376-18417375 Phaseolus vulgaris
Phvul.006G071700 5.0kb upstream 5.0kb upstream 6215 true Chr06: 18417376-18423590 Phaseolus vulgaris
Phvul.006G071700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18418591-18423590 Phaseolus vulgaris
Phvul.006G071700 5.0kb downstream 5.0kb downstream 6215 true Chr06: 18412376-18418590 Phaseolus vulgaris
Phvul.006G071700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18412376-18417375 Phaseolus vulgaris
Phvul.006G071700 10.0kb upstream 10.0kb upstream 11215 true Chr06: 18417376-18428590 Phaseolus vulgaris
Phvul.006G071700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18418591-18428590 Phaseolus vulgaris
Phvul.006G071700 10.0kb downstream 10.0kb downstream 11215 true Chr06: 18407376-18418590 Phaseolus vulgaris
Phvul.006G071700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18407376-18417375 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315733 5265 Fabidae View MSA
124036995 5270 Rosid View MSA
123610140 5271 Pentapetalae View MSA
122644774 5272 Eudicot View MSA
122052109 5273 Angiosperm View MSA
121312968 5274 Embryophyte View MSA
123350103 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0470138 0.0 0.233 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain