Gene : Phvul.006G191900 P. vulgaris v2.1
Defline:  (1 of 10) PF07887 - Calmodulin binding protein-like (Calmodulin_bind) Genomic Order:  1933
Name:  ? Phvul.006G191900 Secondary Identifier:  ? PAC:37171449
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G191900 0.5kb upstream 0.5kb upstream 6172 true Chr06: 29158206-29164377 Phaseolus vulgaris
Phvul.006G191900 0.5kb upstream 0.5kb upstream 500 false Chr06: 29158206-29158705 Phaseolus vulgaris
Phvul.006G191900 0.5kb downstream 0.5kb downstream 6172 true Chr06: 29158706-29164877 Phaseolus vulgaris
Phvul.006G191900 0.5kb downstream 0.5kb downstream 500 false Chr06: 29164378-29164877 Phaseolus vulgaris
Phvul.006G191900 1.0kb upstream 1.0kb upstream 6672 true Chr06: 29157706-29164377 Phaseolus vulgaris
Phvul.006G191900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29157706-29158705 Phaseolus vulgaris
Phvul.006G191900 1.0kb downstream 1.0kb downstream 6672 true Chr06: 29158706-29165377 Phaseolus vulgaris
Phvul.006G191900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29164378-29165377 Phaseolus vulgaris
Phvul.006G191900 2.0kb upstream 2.0kb upstream 7672 true Chr06: 29156706-29164377 Phaseolus vulgaris
Phvul.006G191900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29156706-29158705 Phaseolus vulgaris
Phvul.006G191900 2.0kb downstream 2.0kb downstream 7672 true Chr06: 29158706-29166377 Phaseolus vulgaris
Phvul.006G191900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29164378-29166377 Phaseolus vulgaris
Phvul.006G191900 5.0kb upstream 5.0kb upstream 10672 true Chr06: 29153706-29164377 Phaseolus vulgaris
Phvul.006G191900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29153706-29158705 Phaseolus vulgaris
Phvul.006G191900 5.0kb downstream 5.0kb downstream 10672 true Chr06: 29158706-29169377 Phaseolus vulgaris
Phvul.006G191900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29164378-29169377 Phaseolus vulgaris
Phvul.006G191900 10.0kb upstream 10.0kb upstream 15672 true Chr06: 29148706-29164377 Phaseolus vulgaris
Phvul.006G191900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29148706-29158705 Phaseolus vulgaris
Phvul.006G191900 10.0kb downstream 10.0kb downstream 15672 true Chr06: 29158706-29174377 Phaseolus vulgaris
Phvul.006G191900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29164378-29174377 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041199 5273 Angiosperm View MSA
122311063 5265 Fabidae View MSA
124068342 5270 Rosid View MSA
123753678 5271 Pentapetalae View MSA
122786667 5272 Eudicot View MSA
121350867 5274 Embryophyte View MSA
123381913 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22112 0.0 3.85013   Low
cufflinks 5.3553 0.0 14.4961    
cufflinks 11.3566 0.0 29.4358    
cufflinks 2.72324 0.0 7.89448   Low
cufflinks 7.08831 0.0 18.8856    
cufflinks 13.6837 0.0 35.3757   High
cufflinks 6.36898 0.0 16.9851    
cufflinks 7.81703 0.0 20.5321    
cufflinks 9.48595 0.0 24.7349    
cufflinks 3.91229 0.0 10.9004    
cufflinks 8.20924 0.0 21.6185    

0 Strain