Gene : Phvul.006G191700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23336:SF10 - B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED Genomic Order:  1931
Name:  ? Phvul.006G191700 Secondary Identifier:  ? PAC:37173463
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G191700 0.5kb upstream 0.5kb upstream 12497 true Chr06: 29130004-29142500 Phaseolus vulgaris
Phvul.006G191700 0.5kb upstream 0.5kb upstream 500 false Chr06: 29142001-29142500 Phaseolus vulgaris
Phvul.006G191700 0.5kb downstream 0.5kb downstream 12497 true Chr06: 29129504-29142000 Phaseolus vulgaris
Phvul.006G191700 0.5kb downstream 0.5kb downstream 500 false Chr06: 29129504-29130003 Phaseolus vulgaris
Phvul.006G191700 1.0kb upstream 1.0kb upstream 12997 true Chr06: 29130004-29143000 Phaseolus vulgaris
Phvul.006G191700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29142001-29143000 Phaseolus vulgaris
Phvul.006G191700 1.0kb downstream 1.0kb downstream 12997 true Chr06: 29129004-29142000 Phaseolus vulgaris
Phvul.006G191700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29129004-29130003 Phaseolus vulgaris
Phvul.006G191700 2.0kb upstream 2.0kb upstream 13997 true Chr06: 29130004-29144000 Phaseolus vulgaris
Phvul.006G191700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29142001-29144000 Phaseolus vulgaris
Phvul.006G191700 2.0kb downstream 2.0kb downstream 13997 true Chr06: 29128004-29142000 Phaseolus vulgaris
Phvul.006G191700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29128004-29130003 Phaseolus vulgaris
Phvul.006G191700 5.0kb upstream 5.0kb upstream 16997 true Chr06: 29130004-29147000 Phaseolus vulgaris
Phvul.006G191700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29142001-29147000 Phaseolus vulgaris
Phvul.006G191700 5.0kb downstream 5.0kb downstream 16997 true Chr06: 29125004-29142000 Phaseolus vulgaris
Phvul.006G191700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29125004-29130003 Phaseolus vulgaris
Phvul.006G191700 10.0kb upstream 10.0kb upstream 21997 true Chr06: 29130004-29152000 Phaseolus vulgaris
Phvul.006G191700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29142001-29152000 Phaseolus vulgaris
Phvul.006G191700 10.0kb downstream 10.0kb downstream 21997 true Chr06: 29120004-29142000 Phaseolus vulgaris
Phvul.006G191700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29120004-29130003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303955 5265 Fabidae View MSA
124061756 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45497 0.0 19.5339   Low
cufflinks 12.3215 0.0 31.8504    
cufflinks 15.458 0.0 40.0387    
cufflinks 4.47868 0.0 12.2125   Low
cufflinks 14.2161 0.0 36.7491    
cufflinks 16.2025 0.0 42.0029    
cufflinks 15.8676 0.0 41.1278    
cufflinks 14.4874 0.0 37.5042    
cufflinks 15.2262 0.0 39.4207    
cufflinks 23.301 0.0 61.1917   High
cufflinks 11.654 0.0 30.1465    

0 Strain