Gene : Phvul.009G088700 P. vulgaris v2.1
Defline:  (1 of 2) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) Genomic Order:  911
Name:  ? Phvul.009G088700 Secondary Identifier:  ? PAC:37151012
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G088700 0.5kb upstream 0.5kb upstream 21363 true Chr09: 14281463-14302825 Phaseolus vulgaris
Phvul.009G088700 0.5kb upstream 0.5kb upstream 500 false Chr09: 14281463-14281962 Phaseolus vulgaris
Phvul.009G088700 0.5kb downstream 0.5kb downstream 21363 true Chr09: 14281963-14303325 Phaseolus vulgaris
Phvul.009G088700 0.5kb downstream 0.5kb downstream 500 false Chr09: 14302826-14303325 Phaseolus vulgaris
Phvul.009G088700 1.0kb upstream 1.0kb upstream 21863 true Chr09: 14280963-14302825 Phaseolus vulgaris
Phvul.009G088700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14280963-14281962 Phaseolus vulgaris
Phvul.009G088700 1.0kb downstream 1.0kb downstream 21863 true Chr09: 14281963-14303825 Phaseolus vulgaris
Phvul.009G088700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14302826-14303825 Phaseolus vulgaris
Phvul.009G088700 2.0kb upstream 2.0kb upstream 22863 true Chr09: 14279963-14302825 Phaseolus vulgaris
Phvul.009G088700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14279963-14281962 Phaseolus vulgaris
Phvul.009G088700 2.0kb downstream 2.0kb downstream 22863 true Chr09: 14281963-14304825 Phaseolus vulgaris
Phvul.009G088700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14302826-14304825 Phaseolus vulgaris
Phvul.009G088700 5.0kb upstream 5.0kb upstream 25863 true Chr09: 14276963-14302825 Phaseolus vulgaris
Phvul.009G088700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14276963-14281962 Phaseolus vulgaris
Phvul.009G088700 5.0kb downstream 5.0kb downstream 25863 true Chr09: 14281963-14307825 Phaseolus vulgaris
Phvul.009G088700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14302826-14307825 Phaseolus vulgaris
Phvul.009G088700 10.0kb upstream 10.0kb upstream 30863 true Chr09: 14271963-14302825 Phaseolus vulgaris
Phvul.009G088700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14271963-14281962 Phaseolus vulgaris
Phvul.009G088700 10.0kb downstream 10.0kb downstream 30863 true Chr09: 14281963-14312825 Phaseolus vulgaris
Phvul.009G088700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14302826-14312825 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303514 5265 Fabidae View MSA
124067543 5270 Rosid View MSA
123739750 5271 Pentapetalae View MSA
122789120 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59743 0.0 23.526   Low
cufflinks 16.5519 0.0 61.4445    
cufflinks 23.9657 0.0 95.2559    
cufflinks 7.10744 0.0 22.8694   Low
cufflinks 12.609 0.0 44.9737    
cufflinks 26.856 0.0 110.871    
cufflinks 30.9425 0.0 129.937 High  
cufflinks 28.9798 0.0 121.398 High  
cufflinks 27.615 0.0 112.524    
cufflinks 27.2629 0.0 110.178    
cufflinks 12.59 0.0 45.7868    

0 Strain