Gene : Phvul.009G088100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10050 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE Genomic Order:  906
Name:  ? Phvul.009G088100 Secondary Identifier:  ? PAC:37150141
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G088100 0.5kb upstream 0.5kb upstream 4345 true Chr09: 14230864-14235208 Phaseolus vulgaris
Phvul.009G088100 0.5kb upstream 0.5kb upstream 500 false Chr09: 14230864-14231363 Phaseolus vulgaris
Phvul.009G088100 0.5kb downstream 0.5kb downstream 4345 true Chr09: 14231364-14235708 Phaseolus vulgaris
Phvul.009G088100 0.5kb downstream 0.5kb downstream 500 false Chr09: 14235209-14235708 Phaseolus vulgaris
Phvul.009G088100 1.0kb upstream 1.0kb upstream 4845 true Chr09: 14230364-14235208 Phaseolus vulgaris
Phvul.009G088100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14230364-14231363 Phaseolus vulgaris
Phvul.009G088100 1.0kb downstream 1.0kb downstream 4845 true Chr09: 14231364-14236208 Phaseolus vulgaris
Phvul.009G088100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14235209-14236208 Phaseolus vulgaris
Phvul.009G088100 2.0kb upstream 2.0kb upstream 5845 true Chr09: 14229364-14235208 Phaseolus vulgaris
Phvul.009G088100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14229364-14231363 Phaseolus vulgaris
Phvul.009G088100 2.0kb downstream 2.0kb downstream 5845 true Chr09: 14231364-14237208 Phaseolus vulgaris
Phvul.009G088100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14235209-14237208 Phaseolus vulgaris
Phvul.009G088100 5.0kb upstream 5.0kb upstream 8845 true Chr09: 14226364-14235208 Phaseolus vulgaris
Phvul.009G088100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14226364-14231363 Phaseolus vulgaris
Phvul.009G088100 5.0kb downstream 5.0kb downstream 8845 true Chr09: 14231364-14240208 Phaseolus vulgaris
Phvul.009G088100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14235209-14240208 Phaseolus vulgaris
Phvul.009G088100 10.0kb upstream 10.0kb upstream 13845 true Chr09: 14221364-14235208 Phaseolus vulgaris
Phvul.009G088100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14221364-14231363 Phaseolus vulgaris
Phvul.009G088100 10.0kb downstream 10.0kb downstream 13845 true Chr09: 14231364-14245208 Phaseolus vulgaris
Phvul.009G088100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14235209-14245208 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299626 5265 Fabidae View MSA
124073869 5270 Rosid View MSA
123747000 5271 Pentapetalae View MSA
122786707 5272 Eudicot View MSA
122043043 5273 Angiosperm View MSA
121348450 5274 Embryophyte View MSA
123428555 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.3627 0.0 194.442 High  
cufflinks 72.9451 0.0 195.744 High  
cufflinks 21.8599 0.0 56.8169   Low
cufflinks 84.9072 0.0 230.535 High High
cufflinks 50.9974 0.0 133.362 High  
cufflinks 32.7432 0.0 84.6654 High  
cufflinks 36.8258 0.0 95.4056 High  
cufflinks 41.7569 0.0 108.471 High  
cufflinks 45.224 0.0 117.849 High  
cufflinks 47.4767 0.0 123.862 High  
cufflinks 70.1263 0.0 187.363 High  

0 Strain