Gene : Phvul.006G192300 P. vulgaris v2.1
Genomic Order:  1937 Name:  ? Phvul.006G192300
Secondary Identifier:  ? PAC:37172953
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G192300 0.5kb upstream 0.5kb upstream 1814 true Chr06: 29187141-29188954 Phaseolus vulgaris
Phvul.006G192300 0.5kb upstream 0.5kb upstream 500 false Chr06: 29187141-29187640 Phaseolus vulgaris
Phvul.006G192300 0.5kb downstream 0.5kb downstream 1814 true Chr06: 29187641-29189454 Phaseolus vulgaris
Phvul.006G192300 0.5kb downstream 0.5kb downstream 500 false Chr06: 29188955-29189454 Phaseolus vulgaris
Phvul.006G192300 1.0kb upstream 1.0kb upstream 2314 true Chr06: 29186641-29188954 Phaseolus vulgaris
Phvul.006G192300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29186641-29187640 Phaseolus vulgaris
Phvul.006G192300 1.0kb downstream 1.0kb downstream 2314 true Chr06: 29187641-29189954 Phaseolus vulgaris
Phvul.006G192300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29188955-29189954 Phaseolus vulgaris
Phvul.006G192300 2.0kb upstream 2.0kb upstream 3314 true Chr06: 29185641-29188954 Phaseolus vulgaris
Phvul.006G192300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29185641-29187640 Phaseolus vulgaris
Phvul.006G192300 2.0kb downstream 2.0kb downstream 3314 true Chr06: 29187641-29190954 Phaseolus vulgaris
Phvul.006G192300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29188955-29190954 Phaseolus vulgaris
Phvul.006G192300 5.0kb upstream 5.0kb upstream 6314 true Chr06: 29182641-29188954 Phaseolus vulgaris
Phvul.006G192300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29182641-29187640 Phaseolus vulgaris
Phvul.006G192300 5.0kb downstream 5.0kb downstream 6314 true Chr06: 29187641-29193954 Phaseolus vulgaris
Phvul.006G192300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29188955-29193954 Phaseolus vulgaris
Phvul.006G192300 10.0kb upstream 10.0kb upstream 11314 true Chr06: 29177641-29188954 Phaseolus vulgaris
Phvul.006G192300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29177641-29187640 Phaseolus vulgaris
Phvul.006G192300 10.0kb downstream 10.0kb downstream 11314 true Chr06: 29187641-29198954 Phaseolus vulgaris
Phvul.006G192300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29188955-29198954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791732 5273 Angiosperm View MSA
122301378 5265 Fabidae View MSA
124060799 5270 Rosid View MSA
123743075 5271 Pentapetalae View MSA
122787868 5272 Eudicot View MSA
121063032 5274 Embryophyte View MSA
123102818 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.3238 0.0 78.3812   High
cufflinks 15.9469 0.0 42.1791    
cufflinks 4.1765 0.0 12.5727    
cufflinks 41.9836 0.0 108.772 High High
cufflinks 3.60212 0.0 10.9745    
cufflinks 7.46586 0.0 21.045    
cufflinks 0.797149 0.0 2.84972   Low
cufflinks 0.704991 0.0 2.5571   Low
cufflinks 2.05328 0.0 6.64286    
cufflinks 33.8564 0.0 87.5234   High
cufflinks 5.11366 0.0 14.9422    

0 Strain