Gene : Phvul.006G191300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23423//PTHR23423:SF15 - ORGANIC SOLUTE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1927
Name:  ? Phvul.006G191300 Secondary Identifier:  ? PAC:37172370
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G191300 0.5kb upstream 0.5kb upstream 3726 true Chr06: 29107953-29111678 Phaseolus vulgaris
Phvul.006G191300 0.5kb upstream 0.5kb upstream 500 false Chr06: 29111179-29111678 Phaseolus vulgaris
Phvul.006G191300 0.5kb downstream 0.5kb downstream 3726 true Chr06: 29107453-29111178 Phaseolus vulgaris
Phvul.006G191300 0.5kb downstream 0.5kb downstream 500 false Chr06: 29107453-29107952 Phaseolus vulgaris
Phvul.006G191300 1.0kb upstream 1.0kb upstream 4226 true Chr06: 29107953-29112178 Phaseolus vulgaris
Phvul.006G191300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29111179-29112178 Phaseolus vulgaris
Phvul.006G191300 1.0kb downstream 1.0kb downstream 4226 true Chr06: 29106953-29111178 Phaseolus vulgaris
Phvul.006G191300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29106953-29107952 Phaseolus vulgaris
Phvul.006G191300 2.0kb upstream 2.0kb upstream 5226 true Chr06: 29107953-29113178 Phaseolus vulgaris
Phvul.006G191300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29111179-29113178 Phaseolus vulgaris
Phvul.006G191300 2.0kb downstream 2.0kb downstream 5226 true Chr06: 29105953-29111178 Phaseolus vulgaris
Phvul.006G191300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29105953-29107952 Phaseolus vulgaris
Phvul.006G191300 5.0kb upstream 5.0kb upstream 8226 true Chr06: 29107953-29116178 Phaseolus vulgaris
Phvul.006G191300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29111179-29116178 Phaseolus vulgaris
Phvul.006G191300 5.0kb downstream 5.0kb downstream 8226 true Chr06: 29102953-29111178 Phaseolus vulgaris
Phvul.006G191300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29102953-29107952 Phaseolus vulgaris
Phvul.006G191300 10.0kb upstream 10.0kb upstream 13226 true Chr06: 29107953-29121178 Phaseolus vulgaris
Phvul.006G191300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29111179-29121178 Phaseolus vulgaris
Phvul.006G191300 10.0kb downstream 10.0kb downstream 13226 true Chr06: 29097953-29111178 Phaseolus vulgaris
Phvul.006G191300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29097953-29107952 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312682 5265 Fabidae View MSA
124072343 5270 Rosid View MSA
123745032 5271 Pentapetalae View MSA
122797538 5272 Eudicot View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3905 0.0 31.6573   High
cufflinks 5.91019 0.0 17.602    
cufflinks 6.59179 0.0 19.2861    
cufflinks 13.9919 0.0 38.5193   High
cufflinks 7.61149 0.0 22.2081    
cufflinks 6.24522 0.0 18.4813    
cufflinks 5.88369 0.0 17.6122    
cufflinks 6.29418 0.0 18.5066    
cufflinks 9.66857 0.0 27.5319    
cufflinks 7.16617 0.0 20.8813    
cufflinks 4.88992 0.0 15.0067   Low

0 Strain