Gene : Phvul.009G090248 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  929
Name:  ? Phvul.009G090248 Secondary Identifier:  ? PAC:37149560
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G090248 0.5kb upstream 0.5kb upstream 779 true Chr09: 14523435-14524213 Phaseolus vulgaris
Phvul.009G090248 0.5kb upstream 0.5kb upstream 500 false Chr09: 14523435-14523934 Phaseolus vulgaris
Phvul.009G090248 0.5kb downstream 0.5kb downstream 779 true Chr09: 14523935-14524713 Phaseolus vulgaris
Phvul.009G090248 0.5kb downstream 0.5kb downstream 500 false Chr09: 14524214-14524713 Phaseolus vulgaris
Phvul.009G090248 1.0kb upstream 1.0kb upstream 1279 true Chr09: 14522935-14524213 Phaseolus vulgaris
Phvul.009G090248 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14522935-14523934 Phaseolus vulgaris
Phvul.009G090248 1.0kb downstream 1.0kb downstream 1279 true Chr09: 14523935-14525213 Phaseolus vulgaris
Phvul.009G090248 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14524214-14525213 Phaseolus vulgaris
Phvul.009G090248 2.0kb upstream 2.0kb upstream 2279 true Chr09: 14521935-14524213 Phaseolus vulgaris
Phvul.009G090248 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14521935-14523934 Phaseolus vulgaris
Phvul.009G090248 2.0kb downstream 2.0kb downstream 2279 true Chr09: 14523935-14526213 Phaseolus vulgaris
Phvul.009G090248 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14524214-14526213 Phaseolus vulgaris
Phvul.009G090248 5.0kb upstream 5.0kb upstream 5279 true Chr09: 14518935-14524213 Phaseolus vulgaris
Phvul.009G090248 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14518935-14523934 Phaseolus vulgaris
Phvul.009G090248 5.0kb downstream 5.0kb downstream 5279 true Chr09: 14523935-14529213 Phaseolus vulgaris
Phvul.009G090248 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14524214-14529213 Phaseolus vulgaris
Phvul.009G090248 10.0kb upstream 10.0kb upstream 10279 true Chr09: 14513935-14524213 Phaseolus vulgaris
Phvul.009G090248 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14513935-14523934 Phaseolus vulgaris
Phvul.009G090248 10.0kb downstream 10.0kb downstream 10279 true Chr09: 14523935-14534213 Phaseolus vulgaris
Phvul.009G090248 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14524214-14534213 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313695 5265 Fabidae View MSA
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.3837 0.0 79.162    
cufflinks 23.7202 0.0 83.8786    
cufflinks 307.043 0.0 824.855 High High
cufflinks 103.795 0.0 306.8 High  
cufflinks 109.825 0.0 329.941 High  
cufflinks 405.347 0.0 1069.78 High High
cufflinks 19.0634 0.0 68.9753   Low
cufflinks 28.008 0.0 97.2666 High  
cufflinks 25.7549 0.0 90.3351    
cufflinks 123.196 0.0 364.381 High  
cufflinks 31.7317 0.0 109.318    

0 Strain