Gene : Phvul.006G196300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31662:SF1 - A_IG002N01.32 PROTEIN-RELATED Genomic Order:  1977
Name:  ? Phvul.006G196300 Secondary Identifier:  ? PAC:37171340
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G196300 0.5kb upstream 0.5kb upstream 2406 true Chr06: 29446699-29449104 Phaseolus vulgaris
Phvul.006G196300 0.5kb upstream 0.5kb upstream 500 false Chr06: 29448605-29449104 Phaseolus vulgaris
Phvul.006G196300 0.5kb downstream 0.5kb downstream 2406 true Chr06: 29446199-29448604 Phaseolus vulgaris
Phvul.006G196300 0.5kb downstream 0.5kb downstream 500 false Chr06: 29446199-29446698 Phaseolus vulgaris
Phvul.006G196300 1.0kb upstream 1.0kb upstream 2906 true Chr06: 29446699-29449604 Phaseolus vulgaris
Phvul.006G196300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29448605-29449604 Phaseolus vulgaris
Phvul.006G196300 1.0kb downstream 1.0kb downstream 2906 true Chr06: 29445699-29448604 Phaseolus vulgaris
Phvul.006G196300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29445699-29446698 Phaseolus vulgaris
Phvul.006G196300 2.0kb upstream 2.0kb upstream 3906 true Chr06: 29446699-29450604 Phaseolus vulgaris
Phvul.006G196300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29448605-29450604 Phaseolus vulgaris
Phvul.006G196300 2.0kb downstream 2.0kb downstream 3906 true Chr06: 29444699-29448604 Phaseolus vulgaris
Phvul.006G196300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29444699-29446698 Phaseolus vulgaris
Phvul.006G196300 5.0kb upstream 5.0kb upstream 6906 true Chr06: 29446699-29453604 Phaseolus vulgaris
Phvul.006G196300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29448605-29453604 Phaseolus vulgaris
Phvul.006G196300 5.0kb downstream 5.0kb downstream 6906 true Chr06: 29441699-29448604 Phaseolus vulgaris
Phvul.006G196300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29441699-29446698 Phaseolus vulgaris
Phvul.006G196300 10.0kb upstream 10.0kb upstream 11906 true Chr06: 29446699-29458604 Phaseolus vulgaris
Phvul.006G196300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29448605-29458604 Phaseolus vulgaris
Phvul.006G196300 10.0kb downstream 10.0kb downstream 11906 true Chr06: 29436699-29448604 Phaseolus vulgaris
Phvul.006G196300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29436699-29446698 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305130 5265 Fabidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.6076 0.0 150.416 High  
cufflinks 72.5573 0.0 200.776 High High
cufflinks 41.6841 0.0 109.913 High  
cufflinks 71.6811 0.0 198.109 High High
cufflinks 62.2464 0.0 169.65 High  
cufflinks 37.5063 0.0 98.4519 High Low
cufflinks 40.7684 0.0 108.044 High Low
cufflinks 41.3732 0.0 109.497 High Low
cufflinks 50.0618 0.0 134.538 High  
cufflinks 60.3389 0.0 163.718 High  
cufflinks 68.1584 0.0 187.753 High High

0 Strain