Gene : Phvul.006G197600 P. vulgaris v2.1
Genomic Order:  1990 Name:  ? Phvul.006G197600
Secondary Identifier:  ? PAC:37173840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G197600 0.5kb upstream 0.5kb upstream 6220 true Chr06: 29522969-29529188 Phaseolus vulgaris
Phvul.006G197600 0.5kb upstream 0.5kb upstream 500 false Chr06: 29528689-29529188 Phaseolus vulgaris
Phvul.006G197600 0.5kb downstream 0.5kb downstream 6220 true Chr06: 29522469-29528688 Phaseolus vulgaris
Phvul.006G197600 0.5kb downstream 0.5kb downstream 500 false Chr06: 29522469-29522968 Phaseolus vulgaris
Phvul.006G197600 1.0kb upstream 1.0kb upstream 6720 true Chr06: 29522969-29529688 Phaseolus vulgaris
Phvul.006G197600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29528689-29529688 Phaseolus vulgaris
Phvul.006G197600 1.0kb downstream 1.0kb downstream 6720 true Chr06: 29521969-29528688 Phaseolus vulgaris
Phvul.006G197600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29521969-29522968 Phaseolus vulgaris
Phvul.006G197600 2.0kb upstream 2.0kb upstream 7720 true Chr06: 29522969-29530688 Phaseolus vulgaris
Phvul.006G197600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29528689-29530688 Phaseolus vulgaris
Phvul.006G197600 2.0kb downstream 2.0kb downstream 7720 true Chr06: 29520969-29528688 Phaseolus vulgaris
Phvul.006G197600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29520969-29522968 Phaseolus vulgaris
Phvul.006G197600 5.0kb upstream 5.0kb upstream 10720 true Chr06: 29522969-29533688 Phaseolus vulgaris
Phvul.006G197600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29528689-29533688 Phaseolus vulgaris
Phvul.006G197600 5.0kb downstream 5.0kb downstream 10720 true Chr06: 29517969-29528688 Phaseolus vulgaris
Phvul.006G197600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29517969-29522968 Phaseolus vulgaris
Phvul.006G197600 10.0kb upstream 10.0kb upstream 15720 true Chr06: 29522969-29538688 Phaseolus vulgaris
Phvul.006G197600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29528689-29538688 Phaseolus vulgaris
Phvul.006G197600 10.0kb downstream 10.0kb downstream 15720 true Chr06: 29512969-29528688 Phaseolus vulgaris
Phvul.006G197600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29512969-29522968 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301906 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9122 0.0 42.5783   Low
cufflinks 28.1427 0.0 73.0142    
cufflinks 56.7038 0.0 147.771 High High
cufflinks 65.2365 0.0 170.273 High High
cufflinks 37.1238 0.0 95.9767 High  
cufflinks 43.226 0.0 111.827 High  
cufflinks 25.3558 0.0 66.0017    
cufflinks 21.8917 0.0 57.2039   Low
cufflinks 32.8504 0.0 85.0123 High  
cufflinks 27.7644 0.0 72.07    
cufflinks 40.7919 0.0 105.445 High  

0 Strain