Gene : Phvul.006G194300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27002:SF157 - G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 Genomic Order:  1957
Name:  ? Phvul.006G194300 Secondary Identifier:  ? PAC:37173358
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G194300 0.5kb upstream 0.5kb upstream 4138 true Chr06: 29338573-29342710 Phaseolus vulgaris
Phvul.006G194300 0.5kb upstream 0.5kb upstream 500 false Chr06: 29338573-29339072 Phaseolus vulgaris
Phvul.006G194300 0.5kb downstream 0.5kb downstream 4138 true Chr06: 29339073-29343210 Phaseolus vulgaris
Phvul.006G194300 0.5kb downstream 0.5kb downstream 500 false Chr06: 29342711-29343210 Phaseolus vulgaris
Phvul.006G194300 1.0kb upstream 1.0kb upstream 4638 true Chr06: 29338073-29342710 Phaseolus vulgaris
Phvul.006G194300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29338073-29339072 Phaseolus vulgaris
Phvul.006G194300 1.0kb downstream 1.0kb downstream 4638 true Chr06: 29339073-29343710 Phaseolus vulgaris
Phvul.006G194300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29342711-29343710 Phaseolus vulgaris
Phvul.006G194300 2.0kb upstream 2.0kb upstream 5638 true Chr06: 29337073-29342710 Phaseolus vulgaris
Phvul.006G194300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29337073-29339072 Phaseolus vulgaris
Phvul.006G194300 2.0kb downstream 2.0kb downstream 5638 true Chr06: 29339073-29344710 Phaseolus vulgaris
Phvul.006G194300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29342711-29344710 Phaseolus vulgaris
Phvul.006G194300 5.0kb upstream 5.0kb upstream 8638 true Chr06: 29334073-29342710 Phaseolus vulgaris
Phvul.006G194300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29334073-29339072 Phaseolus vulgaris
Phvul.006G194300 5.0kb downstream 5.0kb downstream 8638 true Chr06: 29339073-29347710 Phaseolus vulgaris
Phvul.006G194300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29342711-29347710 Phaseolus vulgaris
Phvul.006G194300 10.0kb upstream 10.0kb upstream 13638 true Chr06: 29329073-29342710 Phaseolus vulgaris
Phvul.006G194300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29329073-29339072 Phaseolus vulgaris
Phvul.006G194300 10.0kb downstream 10.0kb downstream 13638 true Chr06: 29339073-29352710 Phaseolus vulgaris
Phvul.006G194300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29342711-29352710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618244 5273 Angiosperm View MSA
122255351 5265 Fabidae View MSA
123997109 5270 Rosid View MSA
123571458 5271 Pentapetalae View MSA
122606183 5272 Eudicot View MSA
120890351 5274 Embryophyte View MSA
122931010 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.259024 0.0 0.972707 Low  
cufflinks 0.385096 0.0 1.39939 Low  
cufflinks 0.320439 0.0 1.18179 Low  
cufflinks 0.277076 0.0 1.04412 Low  
cufflinks 0.203347 0.0 0.785123 Low  
cufflinks 0.432904 0.0 1.55591 Low  
cufflinks 1.06283 0.0 3.4736   High
cufflinks 1.23607 0.0 3.94341   High
cufflinks 2.05001 0.0 6.22949   High
cufflinks 0.438049 0.0 1.57426    
cufflinks 0.145809 0.0 0.576649 Low Low

0 Strain