Gene : Phvul.009G091300 P. vulgaris v2.1

Defline:  (1 of 1) KOG3306 - Predicted membrane protein Genomic Order:  944
Name:  ? Phvul.009G091300 Secondary Identifier:  ? PAC:37151153

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G091300 0.5kb upstream 0.5kb upstream 3592 true Chr09: 14628035-14631626 Phaseolus vulgaris
Phvul.009G091300 0.5kb upstream 0.5kb upstream 500 false Chr09: 14631127-14631626 Phaseolus vulgaris
Phvul.009G091300 0.5kb downstream 0.5kb downstream 3592 true Chr09: 14627535-14631126 Phaseolus vulgaris
Phvul.009G091300 0.5kb downstream 0.5kb downstream 500 false Chr09: 14627535-14628034 Phaseolus vulgaris
Phvul.009G091300 1.0kb upstream 1.0kb upstream 4092 true Chr09: 14628035-14632126 Phaseolus vulgaris
Phvul.009G091300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14631127-14632126 Phaseolus vulgaris
Phvul.009G091300 1.0kb downstream 1.0kb downstream 4092 true Chr09: 14627035-14631126 Phaseolus vulgaris
Phvul.009G091300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14627035-14628034 Phaseolus vulgaris
Phvul.009G091300 2.0kb upstream 2.0kb upstream 5092 true Chr09: 14628035-14633126 Phaseolus vulgaris
Phvul.009G091300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14631127-14633126 Phaseolus vulgaris
Phvul.009G091300 2.0kb downstream 2.0kb downstream 5092 true Chr09: 14626035-14631126 Phaseolus vulgaris
Phvul.009G091300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14626035-14628034 Phaseolus vulgaris
Phvul.009G091300 5.0kb upstream 5.0kb upstream 8092 true Chr09: 14628035-14636126 Phaseolus vulgaris
Phvul.009G091300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14631127-14636126 Phaseolus vulgaris
Phvul.009G091300 5.0kb downstream 5.0kb downstream 8092 true Chr09: 14623035-14631126 Phaseolus vulgaris
Phvul.009G091300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14623035-14628034 Phaseolus vulgaris
Phvul.009G091300 10.0kb upstream 10.0kb upstream 13092 true Chr09: 14628035-14641126 Phaseolus vulgaris
Phvul.009G091300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14631127-14641126 Phaseolus vulgaris
Phvul.009G091300 10.0kb downstream 10.0kb downstream 13092 true Chr09: 14618035-14631126 Phaseolus vulgaris
Phvul.009G091300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14618035-14628034 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304302 5265 Fabidae View MSA
124061047 5270 Rosid View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2345 0.0 81.1999    
cufflinks 29.9082 0.0 77.928    
cufflinks 24.1491 0.0 63.5195    
cufflinks 44.6142 0.0 115.376 High High
cufflinks 20.7198 0.0 55.3958    
cufflinks 25.6304 0.0 67.1942    
cufflinks 23.0422 0.0 60.7528    
cufflinks 27.9697 0.0 72.849 High  
cufflinks 26.4678 0.0 69.3477    
cufflinks 14.3544 0.0 39.4011   Low
cufflinks 30.384 0.0 79.2595    

0 Strain