Gene : Phvul.006G199900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21535:SF33 - ZINC TRANSPORT PROTEIN ZNTB Genomic Order:  2013
Name:  ? Phvul.006G199900 Secondary Identifier:  ? PAC:37172141
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G199900 0.5kb upstream 0.5kb upstream 5907 true Chr06: 29674234-29680140 Phaseolus vulgaris
Phvul.006G199900 0.5kb upstream 0.5kb upstream 500 false Chr06: 29679641-29680140 Phaseolus vulgaris
Phvul.006G199900 0.5kb downstream 0.5kb downstream 5907 true Chr06: 29673734-29679640 Phaseolus vulgaris
Phvul.006G199900 0.5kb downstream 0.5kb downstream 500 false Chr06: 29673734-29674233 Phaseolus vulgaris
Phvul.006G199900 1.0kb upstream 1.0kb upstream 6407 true Chr06: 29674234-29680640 Phaseolus vulgaris
Phvul.006G199900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29679641-29680640 Phaseolus vulgaris
Phvul.006G199900 1.0kb downstream 1.0kb downstream 6407 true Chr06: 29673234-29679640 Phaseolus vulgaris
Phvul.006G199900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29673234-29674233 Phaseolus vulgaris
Phvul.006G199900 2.0kb upstream 2.0kb upstream 7407 true Chr06: 29674234-29681640 Phaseolus vulgaris
Phvul.006G199900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29679641-29681640 Phaseolus vulgaris
Phvul.006G199900 2.0kb downstream 2.0kb downstream 7407 true Chr06: 29672234-29679640 Phaseolus vulgaris
Phvul.006G199900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29672234-29674233 Phaseolus vulgaris
Phvul.006G199900 5.0kb upstream 5.0kb upstream 10407 true Chr06: 29674234-29684640 Phaseolus vulgaris
Phvul.006G199900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29679641-29684640 Phaseolus vulgaris
Phvul.006G199900 5.0kb downstream 5.0kb downstream 10407 true Chr06: 29669234-29679640 Phaseolus vulgaris
Phvul.006G199900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29669234-29674233 Phaseolus vulgaris
Phvul.006G199900 10.0kb upstream 10.0kb upstream 15407 true Chr06: 29674234-29689640 Phaseolus vulgaris
Phvul.006G199900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29679641-29689640 Phaseolus vulgaris
Phvul.006G199900 10.0kb downstream 10.0kb downstream 15407 true Chr06: 29664234-29679640 Phaseolus vulgaris
Phvul.006G199900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29664234-29674233 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299036 5265 Fabidae View MSA
124065793 5270 Rosid View MSA
123740987 5271 Pentapetalae View MSA
122792184 5272 Eudicot View MSA
122047897 5273 Angiosperm View MSA
121347577 5274 Embryophyte View MSA
123380575 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32088 0.0 9.53276   Low
cufflinks 3.07456 0.0 8.9317   Low
cufflinks 4.95047 0.0 13.6982    
cufflinks 4.37718 0.0 12.3926    
cufflinks 5.60071 0.0 15.4166    
cufflinks 5.71991 0.0 15.6563   High
cufflinks 5.01031 0.0 13.8643    
cufflinks 4.22606 0.0 11.8298    
cufflinks 6.26513 0.0 17.0856   High
cufflinks 3.94337 0.0 11.163    
cufflinks 4.81258 0.0 13.4193    

0 Strain