Gene : Phvul.009G094200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Genomic Order:  973
Name:  ? Phvul.009G094200 Secondary Identifier:  ? PAC:37150533
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1001 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G094200 0.5kb upstream 0.5kb upstream 6679 true Chr09: 14964365-14971043 Phaseolus vulgaris
Phvul.009G094200 0.5kb upstream 0.5kb upstream 500 false Chr09: 14970544-14971043 Phaseolus vulgaris
Phvul.009G094200 0.5kb downstream 0.5kb downstream 6679 true Chr09: 14963865-14970543 Phaseolus vulgaris
Phvul.009G094200 0.5kb downstream 0.5kb downstream 500 false Chr09: 14963865-14964364 Phaseolus vulgaris
Phvul.009G094200 1.0kb upstream 1.0kb upstream 7179 true Chr09: 14964365-14971543 Phaseolus vulgaris
Phvul.009G094200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14970544-14971543 Phaseolus vulgaris
Phvul.009G094200 1.0kb downstream 1.0kb downstream 7179 true Chr09: 14963365-14970543 Phaseolus vulgaris
Phvul.009G094200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14963365-14964364 Phaseolus vulgaris
Phvul.009G094200 2.0kb upstream 2.0kb upstream 8179 true Chr09: 14964365-14972543 Phaseolus vulgaris
Phvul.009G094200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14970544-14972543 Phaseolus vulgaris
Phvul.009G094200 2.0kb downstream 2.0kb downstream 8179 true Chr09: 14962365-14970543 Phaseolus vulgaris
Phvul.009G094200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14962365-14964364 Phaseolus vulgaris
Phvul.009G094200 5.0kb upstream 5.0kb upstream 11179 true Chr09: 14964365-14975543 Phaseolus vulgaris
Phvul.009G094200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14970544-14975543 Phaseolus vulgaris
Phvul.009G094200 5.0kb downstream 5.0kb downstream 11179 true Chr09: 14959365-14970543 Phaseolus vulgaris
Phvul.009G094200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14959365-14964364 Phaseolus vulgaris
Phvul.009G094200 10.0kb upstream 10.0kb upstream 16179 true Chr09: 14964365-14980543 Phaseolus vulgaris
Phvul.009G094200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14970544-14980543 Phaseolus vulgaris
Phvul.009G094200 10.0kb downstream 10.0kb downstream 16179 true Chr09: 14954365-14970543 Phaseolus vulgaris
Phvul.009G094200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14954365-14964364 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304699 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3149 0.0 61.9628   Low
cufflinks 121.257 0.0 399.607 High  
cufflinks 205.086 0.0 764.593 High  
cufflinks 112.965 0.0 361.699 High  
cufflinks 148.001 0.0 505.069 High  
cufflinks 197.52 0.0 727.026 High  
cufflinks 140.662 0.0 479.154 High  
cufflinks 106.13 0.0 342.618 High  
cufflinks 162.364 0.0 567.754 High  
cufflinks 145.076 0.0 495.43 High  
cufflinks 176.752 0.0 627.764 High  

0 Strain