Gene : Phvul.009G081300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Genomic Order:  834
Name:  ? Phvul.009G081300 Secondary Identifier:  ? PAC:37149644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G081300 0.5kb upstream 0.5kb upstream 4357 true Chr09: 13408343-13412699 Phaseolus vulgaris
Phvul.009G081300 0.5kb upstream 0.5kb upstream 500 false Chr09: 13408343-13408842 Phaseolus vulgaris
Phvul.009G081300 0.5kb downstream 0.5kb downstream 4357 true Chr09: 13408843-13413199 Phaseolus vulgaris
Phvul.009G081300 0.5kb downstream 0.5kb downstream 500 false Chr09: 13412700-13413199 Phaseolus vulgaris
Phvul.009G081300 1.0kb upstream 1.0kb upstream 4857 true Chr09: 13407843-13412699 Phaseolus vulgaris
Phvul.009G081300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13407843-13408842 Phaseolus vulgaris
Phvul.009G081300 1.0kb downstream 1.0kb downstream 4857 true Chr09: 13408843-13413699 Phaseolus vulgaris
Phvul.009G081300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13412700-13413699 Phaseolus vulgaris
Phvul.009G081300 2.0kb upstream 2.0kb upstream 5857 true Chr09: 13406843-13412699 Phaseolus vulgaris
Phvul.009G081300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13406843-13408842 Phaseolus vulgaris
Phvul.009G081300 2.0kb downstream 2.0kb downstream 5857 true Chr09: 13408843-13414699 Phaseolus vulgaris
Phvul.009G081300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13412700-13414699 Phaseolus vulgaris
Phvul.009G081300 5.0kb upstream 5.0kb upstream 8857 true Chr09: 13403843-13412699 Phaseolus vulgaris
Phvul.009G081300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13403843-13408842 Phaseolus vulgaris
Phvul.009G081300 5.0kb downstream 5.0kb downstream 8857 true Chr09: 13408843-13417699 Phaseolus vulgaris
Phvul.009G081300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13412700-13417699 Phaseolus vulgaris
Phvul.009G081300 10.0kb upstream 10.0kb upstream 13857 true Chr09: 13398843-13412699 Phaseolus vulgaris
Phvul.009G081300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13398843-13408842 Phaseolus vulgaris
Phvul.009G081300 10.0kb downstream 10.0kb downstream 13857 true Chr09: 13408843-13422699 Phaseolus vulgaris
Phvul.009G081300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13412700-13422699 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122300872 5265 Fabidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.938157 0.0 3.05177    
cufflinks 3.73349 0.0 10.4718    
cufflinks 0.511604 0.0 1.78443 Low Low
cufflinks 0.724307 0.0 2.45668   Low
cufflinks 2.17403 0.0 6.49648    
cufflinks 1.05212 0.0 3.38799    
cufflinks 9.2249 0.0 24.1309   High
cufflinks 14.2153 0.0 36.7464   High
cufflinks 9.59921 0.0 25.0906   High
cufflinks 1.16479 0.0 3.71468    
cufflinks 2.03732 0.0 6.12234    

0 Strain